RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 POLR1BQ9H9Y6 1135 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 LATS2Q9NRM7 1088 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 KLC4Q9NSK0 619 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SYBUQ9NX95 663 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CPNE7Q9UBL6 633 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 RNF14Q9UBS8 474 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 ZNHIT2Q9UHR6 403 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 DCTN4Q9UJW0 460 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 CDYLQ9Y232 598 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 TCAF1Q9Y4C2 921 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 PCDHGA7Q9Y5G6 932 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 SLC30A1Q9Y6M5 507 aa5.6□□□□□ -1.51
CUX1-208ENST00000485792 IGHV5-10-1A0A0J9YXX1 117 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ZCWPW2A0A1B0GU75 182 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 SLC5A10A0PJK1 596 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CCDC162PA2VCL2 907 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 OR52A4PA6NMU1 304 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 TMX2-CTNND1H3BSU7 103 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 HGSO14964 777 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 NVLO15381 856 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 TOX3O15405 576 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 HCRTR1O43613 425 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 KIF5CO60282 957 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 OR1I1O60431 355 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 NRP2O60462 931 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 PHF2O75151 1096 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 GPC4O75487 556 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 POP7O75817 140 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 SASH3O75995 380 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ASMTLO95671 621 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 IFNB1P01574 187 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RPLP0P05388 317 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 CTSBP07858 339 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ITGA2BP08514 1039 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ANKRD34CP0C6C1 535 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 THRAP10827 490 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ATP1B2P14415 290 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 SLC2A4P14672 509 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ITIH1P19827 911 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RPS3P23396 243 aaKnown RBP eCLIP5.59□□□□□ -1.51
CUX1-208ENST00000485792 ACADLP28330 430 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 NMBRP28336 390 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 MC4RP32245 332 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 EIF2S3P41091 472 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 NSG1P42857 185 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CD151P48509 253 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 TERF1P54274 439 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 DRG2P55039 364 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 GFERP55789 205 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 PCBP4P57723 403 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 OR1D5P58170 312 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CYP4F3Q08477 520 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RPA4Q13156 261 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 TRA2AQ13595 282 aaKnown RBP eCLIP5.59□□□□□ -1.51
CUX1-208ENST00000485792 NFE2L1Q14494 772 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 GBX1Q14549 363 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 TBC1D25Q3MII6 688 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RNASEH2BQ5TBB1 312 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 NKAIN2Q5VXU1 208 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 TMEM71Q6P5X7 295 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CCDC137Q6PK04 289 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 CES3Q6UWW8 571 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CERS6Q6ZMG9 384 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 SLCO4C1Q6ZQN7 724 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 TMEM26Q6ZUK4 368 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 AMZ2Q86W34 360 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 SERPINA9Q86WD7 417 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 DTX1Q86Y01 620 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RASGRP3Q8IV61 690 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 VRK3Q8IV63 474 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RBM12BQ8IXT5 1001 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 LSMEM2Q8N112 164 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 GOLGA6L1Q8N7Z2 621 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CCDC89Q8N998 374 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 OR4L1Q8NH43 312 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 GIMAP7Q8NHV1 300 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 FLVCR1-AS1Q8TAF5 88 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 RSC1A1Q92681 617 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 HDAC10Q969S8 669 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 MAGOHBQ96A72 148 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 SH3KBP1Q96B97 665 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 SGF29Q96ES7 293 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ATXN7L3BQ96GX2 97 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ZNF578Q96N58 590 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 BIRC8Q96P09 236 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 FCRL3Q96P31 734 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 BBC3Q96PG8 261 aaPredicted RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 GFM1Q96RP9 751 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 TRIM51Q9BSJ1 452 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 MENTQ9BUN1 341 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 DDX47Q9H0S4 455 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 P2RY12Q9H244 342 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CCDC86Q9H6F5 360 aaKnown RBP5.59□□□□□ -1.51
CUX1-208ENST00000485792 RDH14Q9HBH5 336 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 PRDM8Q9NQV8 689 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 CHRAC1Q9NRG0 131 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 POT1Q9NUX5 634 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 FOXJ2Q9P0K8 574 aa5.59□□□□□ -1.51
CUX1-208ENST00000485792 ZFATQ9P243 1243 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms