RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 MAP3K7O43318 606 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 KIF1CO43896 1103 aaKnown RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 ANKRD34CP0C6C1 535 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 LIPCP11150 499 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CDH3P22223 829 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 PTGIRP43119 386 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 ABRQ12979 859 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CLN3Q13286 438 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 RNASEH2BQ5TBB1 312 aaKnown RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 ARHGAP40Q5TG30 622 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 TTC23LQ6PF05 361 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 SYT10Q6XYQ8 523 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CCDC81Q6ZN84 652 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 PRSS42Q7Z5A4 293 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 RASGRP3Q8IV61 690 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 OR52E1Q8NGJ3 308 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 GABPB2Q8TAK5 448 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 STAMBPL1Q96FJ0 436 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CRELD1Q96HD1 420 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 ELMO2Q96JJ3 720 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 FCRL3Q96P31 734 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 OR6C1Q96RD1 312 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CCNL2Q96S94 520 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 TCF12Q99081 682 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 KRT12Q99456 494 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CD180Q99467 661 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 MAP3K3Q99759 626 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 ZPBPQ9BS86 351 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 TRIM31Q9BZY9 425 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 RAB33BQ9H082 229 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CCDC68Q9H2F9 335 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 ZNF768Q9H5H4 540 aaKnown RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 XKR8Q9H6D3 395 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 C20orf96Q9NUD7 363 aaPredicted RBP12.18□□□□□ -0.46
PTCD1-205ENST00000485746 SOHLH2Q9NX45 425 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 POLG2Q9UHN1 485 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 VPS9D1Q9Y2B5 631 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CRYL1Q9Y2S2 319 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 PCDHGA3Q9Y5H0 932 aa12.18□□□□□ -0.46
PTCD1-205ENST00000485746 CEP295Q9C0D2 2601 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 TLCD2A6NGC4 264 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 H3BMM5 538 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 MATN2O00339 956 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 RPN2P04844 631 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 CHRM3P20309 590 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 OGNP20774 298 aaKnown RBP12.17□□□□□ -0.46
PTCD1-205ENST00000485746 RPS3P23396 243 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTCD1-205ENST00000485746 CCR7P32248 378 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 PPP1CAP62136 330 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 TGIF1Q15583 401 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 LONRF1Q17RB8 773 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 BBS9Q3SYG4 887 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 ZNF658BQ4V348 819 aaPredicted RBP12.17□□□□□ -0.46
PTCD1-205ENST00000485746 TMTC4Q5T4D3 741 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 XKR5Q6UX68 686 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 OTOAQ7RTW8 1153 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 GPR155Q7Z3F1 870 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 AMIGO1Q86WK6 493 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 TBC1D21Q8IYX1 336 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 IL22RA1Q8N6P7 574 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 ZSCAN1Q8NBB4 408 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 OR5AR1Q8NGP9 310 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 CALML6Q8TD86 181 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 SLCO2A1Q92959 643 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 FOPNLQ96NB1 174 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 TFB2MQ9H5Q4 396 aaKnown RBP12.17□□□□□ -0.46
PTCD1-205ENST00000485746 CPNE5Q9HCH3 593 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 APMAPQ9HDC9 416 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 PDE7BQ9NP56 450 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 IL1RAPL1Q9NZN1 696 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 ACSL6Q9UKU0 697 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 CHD8Q9HCK8 2581 aa12.17□□□□□ -0.46
PTCD1-205ENST00000485746 IGHV5-51A0A0C4DH38 117 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 EFCAB8A8MWE9 144 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 C2orf74A8MZ97 194 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 NDC80O14777 642 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 TTI1O43156 1089 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 RAD1O60671 282 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 USP1O94782 785 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 NELFEP18615 380 aaKnown RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 PGAM1P18669 254 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 ARNTP27540 789 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 AOAHP28039 575 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 ACADLP28330 430 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 ETF1P62495 437 aaKnown RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 SH3BP2P78314 561 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 ACY1Q03154 408 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 DHX9Q08211 1270 aaKnown RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 VAC14Q08AM6 782 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 MORF4L2Q15014 288 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 ZNF470Q6ECI4 717 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 CACNA2D3Q8IZS8 1091 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 PDIK1LQ8N165 341 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 BMPERQ8N8U9 685 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 LKAAEAR1Q8TD35 194 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 KLHL6Q8WZ60 621 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 PMEPA1Q969W9 287 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 SNF8Q96H20 258 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms