RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 OR52A5Q9H2C5 316 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 LRRC40Q9H9A6 602 aa16.67■□□□□ 0.26
SMC4-216ENST00000485645 NLE1Q9NVX2 485 aaPredicted RBP16.67■□□□□ 0.26
SMC4-216ENST00000485645 SPTBP11277 2137 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 MAP3K7O43318 606 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 TPH1P17752 444 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 CD151P48509 253 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 GSDMDP57764 484 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 PTPN13Q12923 2485 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 RPA4Q13156 261 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 GPS2Q13227 327 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 ZNF517Q6ZMY9 492 aaPredicted RBP16.66■□□□□ 0.26
SMC4-216ENST00000485645 KIAA1328Q86T90 577 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 STYXQ8WUJ0 223 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 CPT1BQ92523 772 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 CDKN2AIPNLQ96HQ2 116 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 LRFN5Q96NI6 719 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 TFB2MQ9H5Q4 396 aaKnown RBP16.66■□□□□ 0.26
SMC4-216ENST00000485645 SYTL2Q9HCH5 934 aa16.66■□□□□ 0.26
SMC4-216ENST00000485645 MIF4GDA9UHW6 222 aaKnown RBP16.65■□□□□ 0.26
SMC4-216ENST00000485645 DDX3YO15523 660 aaKnown RBP16.65■□□□□ 0.26
SMC4-216ENST00000485645 PSMD3O43242 534 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 DNAJB5O75953 348 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 METTL18O95568 372 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 GSTM1P09488 218 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 PRSS56P0CW18 603 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 PDHA2P29803 388 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 PRDX3P30048 256 aaKnown RBP16.65■□□□□ 0.26
SMC4-216ENST00000485645 GSTM4Q03013 218 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 CACNG1Q06432 222 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 POU6F1Q14863 301 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 P3H1Q32P28 736 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 ZNF658BQ4V348 819 aaPredicted RBP16.65■□□□□ 0.26
SMC4-216ENST00000485645 IZUMO3Q5VZ72 239 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 SYCE1Q8N0S2 351 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 CLDN19Q8N6F1 224 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 SLC38A9Q8NBW4 561 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 PHC3Q8NDX5 983 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 OR52E1Q8NGJ3 308 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 TFGQ92734 400 aaPredicted RBP16.65■□□□□ 0.26
SMC4-216ENST00000485645 ALS2CR12Q96Q35 445 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 CHST8Q9H2A9 424 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 MVB12BQ9H7P6 319 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 PACSIN2Q9UNF0 486 aaPredicted RBP16.65■□□□□ 0.26
SMC4-216ENST00000485645 PIKFYVEQ9Y2I7 2098 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 DOPEY2Q9Y3R5 2298 aa16.65■□□□□ 0.26
SMC4-216ENST00000485645 COL12A1Q99715 3063 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 FLNCQ14315 2725 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 TMEM150CB9EJG8 249 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 MEN1O00255 615 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 BTN3A3O00478 584 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 BTN3A1O00481 513 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 AP2A2O94973 939 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 MSL3P1P0C860 447 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 PREPP48147 710 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 ABRQ12979 859 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 PRKG2Q13237 762 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 IL10RAQ13651 578 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 LAMB3Q13751 1172 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 PLEKHS1Q5SXH7 462 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 PRAMEF17Q5VTA0 474 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 MICALCLQ6ZW33 695 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 AMIGO1Q86WK6 493 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 DSELQ8IZU8 1212 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 CLIP3Q96DZ5 547 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 TRIM55Q9BYV6 548 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 SMARCAL1Q9NZC9 954 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 SERTAD3Q9UJW9 196 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 SEC16AO15027 2179 aa16.64■□□□□ 0.25
SMC4-216ENST00000485645 RELNP78509 3460 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 CYSRT1A8MQ03 144 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 C2orf74A8MZ97 194 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 QSOX1O00391 747 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 AP2A1O95782 977 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 RAB40ALP0C0E4 278 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 ST6GAL1P15907 406 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 CYP2A7P20853 494 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 NSG1P42857 185 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 GDF10P55107 478 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 KIF5AQ12840 1032 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 KLF1Q13351 362 aaPredicted RBP16.63■□□□□ 0.25
SMC4-216ENST00000485645 BOP1Q14137 746 aaKnown RBP16.63■□□□□ 0.25
SMC4-216ENST00000485645 UBAP2LQ14157 1087 aaKnown RBP16.63■□□□□ 0.25
SMC4-216ENST00000485645 DBN1Q16643 649 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 PIANPQ8IYJ0 282 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 TXLNBQ8N3L3 684 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 OR1L3Q8NH93 324 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 NRTNQ99748 197 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 BAG1Q99933 345 aaPredicted RBP16.63■□□□□ 0.25
SMC4-216ENST00000485645 TMEM121Q9BTD3 319 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 HGH1Q9BTY7 390 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 PITPNM3Q9BZ71 974 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 SLC7A5P2Q9GIP4 190 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 XKR8Q9H6D3 395 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 ACTR5Q9H9F9 607 aaPredicted RBP16.63■□□□□ 0.25
SMC4-216ENST00000485645 ACSS2Q9NR19 701 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 PIH1D1Q9NWS0 290 aaKnown RBP16.63■□□□□ 0.25
SMC4-216ENST00000485645 SNX7Q9UNH6 387 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 PLAAQ9Y263 795 aa16.63■□□□□ 0.25
SMC4-216ENST00000485645 R3HDM2Q9Y2K5 976 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms