RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 FAM136AQ96C01 138 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 PANX3Q96QZ0 392 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 FERD3LQ96RJ6 166 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 NRTNQ99748 197 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 HGH1Q9BTY7 390 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 SLC17A6Q9P2U8 582 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 DKK4Q9UBT3 224 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 MED16Q9Y2X0 877 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 LOXL2Q9Y4K0 774 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 COLEC10Q9Y6Z7 277 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 WDFY3Q8IZQ1 3526 aa13.23□□□□□ -0.29
SOX2-OT-209ENST00000485035 ARHGEF17Q96PE2 2063 aaPredicted RBP13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 CEP295Q9C0D2 2601 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 CTAGE15A4D2H0 777 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 TMEM8BA6NDV4 472 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 H3BMM5 538 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 PLD2O14939 933 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 HAUS5O94927 633 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 SLCO2B1O94956 709 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 C9P02748 559 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 APOA4P06727 396 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 CTAGE8P0CG41 777 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 PKMP14618 531 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 NDUFS1P28331 727 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 GABRB3P28472 473 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 LEPRP48357 1165 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 PLTPP55058 493 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 PPP1CAP62136 330 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 EIF3IQ13347 325 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 TRA2AQ13595 282 aaKnown RBP eCLIP13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 FRG1Q14331 258 aaKnown RBP13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 KRT33BQ14525 404 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 TMED2Q15363 201 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 SNAP47Q5SQN1 464 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 FOXR1Q6PIV2 292 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 CNSTQ6PJW8 725 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 CTAGE6Q86UF2 777 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 PLXDC1Q8IUK5 500 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 SPNS2Q8IVW8 549 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 CTAGE4Q8IX94 777 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 ACVR1CQ8NER5 493 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 OR5AR1Q8NGP9 310 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 ASZ1Q8WWH4 475 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 MVB12BQ9H7P6 319 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 SAYSD1Q9NPB0 183 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 ASCL3Q9NQ33 180 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 KLHL3Q9UH77 587 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 ASF1AQ9Y294 204 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 PCDHGA8Q9Y5G5 932 aa13.22□□□□□ -0.29
SOX2-OT-209ENST00000485035 ZFC3H1O60293 1989 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 RP1P56715 2156 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 OR6C74A6NCV1 312 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 OR5K3A6NET4 321 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 A8MU76 341 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 TAF4O00268 1085 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 HGSO14964 777 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 EIF3HO15372 352 aaKnown RBP eCLIP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 CAPN5O15484 640 aaPredicted RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 DXOO77932 396 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 TPBGLP0DKB5 382 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 ITIH1P19827 911 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 ABCG1P45844 678 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 CARSP49589 748 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 GUCY2DQ02846 1103 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 CAV1Q03135 178 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 PRKG2Q13237 762 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 GBX1Q14549 363 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 TEDDM1Q5T9Z0 273 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 IGF2-ASQ6U949 168 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 OTOAQ7RTW8 1153 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 ARHGAP22Q7Z5H3 698 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 FBXO39Q8N4B4 442 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 OR52E1Q8NGJ3 308 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 GIMAP7Q8NHV1 300 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 SLC46A1Q96NT5 459 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 TGM7Q96PF1 710 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 SLC30A3Q99726 388 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 CMKLR1Q99788 373 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 RAB33BQ9H082 229 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 PPANQ9NQ55 473 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 EPHA6Q9UF33 1036 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 PISDQ9UG56 409 aa13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 DMGDHQ9UI17 866 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 GOLGA4Q13439 2230 aaKnown RBP13.21□□□□□ -0.29
SOX2-OT-209ENST00000485035 CDRT15L2A8MXV6 281 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 KPNA5O15131 536 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 KIF1CO43896 1103 aaKnown RBP13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 TNFSF15O95150 251 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 AHSGP02765 367 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 CCL4P13236 92 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 CHRM3P20309 590 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 ETV5P41161 510 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 CLCN7P51798 805 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 ABRQ12979 859 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 TBC1D25Q3MII6 688 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 PLEKHS1Q5SXH7 462 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 IRGCQ6NXR0 463 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 CAPN12Q6ZSI9 719 aa13.2□□□□□ -0.3
SOX2-OT-209ENST00000485035 FAM92BQ6ZTR7 304 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms