RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 YIPF1Q9Y548 306 aa6.37□□□□□ -1.39
UBR3-210ENST00000484596 KDM5BQ9UGL1 1544 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 ZNF541Q9H0D2 1346 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 ZCWPW2A0A1B0GU75 182 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 PSMA7O14818 248 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 IPO8O15397 1037 aaKnown RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 SLCO2B1O94956 709 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 ZWINTO95229 277 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 NMBRP28336 390 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 TLX1P31314 330 aaPredicted RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 ISL1P61371 349 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 SNRPEP62304 92 aaKnown RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 TROAPQ12815 778 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 CBWD6Q4V339 395 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 FAM98BQ52LJ0 330 aaKnown RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 RAB6CQ53S08 254 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 CBWD3Q5JTY5 395 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 ARMC4Q5T2S8 1044 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 CAVIN1Q6NZI2 390 aaKnown RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 LDB1Q86U70 411 aaPredicted RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 NAGSQ8N159 534 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 PI4KAP1Q8N8J0 262 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 RBM15BQ8NDT2 890 aaKnown RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 CFAP61Q8NHU2 1237 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 AFAP1L1Q8TED9 768 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 FAM162AQ96A26 154 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 LINC00615Q96LM1 132 aaPredicted RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 NUP85Q9BW27 656 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 FAM129AQ9BZQ8 928 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 GPR88Q9GZN0 384 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 RAB6CQ9H0N0 254 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 GOLPH3LQ9H4A5 285 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 OLAHQ9NV23 265 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 DDX25Q9UHL0 483 aaKnown RBP6.36□□□□□ -1.39
UBR3-210ENST00000484596 DLGAP4Q9Y2H0 992 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 CFAP43Q8NDM7 1665 aa6.36□□□□□ -1.39
UBR3-210ENST00000484596 ABCA8O94911 1581 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 EPRSP07814 1512 aaKnown RBP6.35□□□□□ -1.39
UBR3-210ENST00000484596 EDDM13A0A1B0GTR0 161 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 ASPDHA6ND91 283 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 WDR46O15213 610 aaKnown RBP6.35□□□□□ -1.39
UBR3-210ENST00000484596 SPRY1O43609 319 aaPredicted RBP6.35□□□□□ -1.39
UBR3-210ENST00000484596 PRAMEF11O60813 436 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 LDB3O75112 727 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 TRUB2O95900 331 aaKnown RBP6.35□□□□□ -1.39
UBR3-210ENST00000484596 HLA-DOBP13765 273 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 ITGA2P17301 1181 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 NPY4RP50391 375 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 COASYQ13057 564 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 HYAL4Q2M3T9 481 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 C6orf163Q5TEZ5 329 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 OR7E24Q6IFN5 339 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 C11orf88Q6PI97 169 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 SUSD1Q6UWL2 747 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 Q75L30 129 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 ERN2Q76MJ5 926 aaKnown RBP6.35□□□□□ -1.39
UBR3-210ENST00000484596 GLRX5Q86SX6 157 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 ADIPOR2Q86V24 386 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 OR10S1Q8NGN2 331 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 LMO3Q8TAP4 145 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 TBC1D16Q8TBP0 767 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 SECTM1Q8WVN6 248 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 SORCS1Q8WY21 1168 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 ZNF830Q96NB3 372 aaPredicted RBP6.35□□□□□ -1.39
UBR3-210ENST00000484596 NEK1Q96PY6 1258 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 FNBP1Q96RU3 617 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 C2orf40Q9H1Z8 148 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 EVA1AQ9H8M9 152 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 MBNL1Q9NR56 388 aaKnown RBP6.35□□□□□ -1.39
UBR3-210ENST00000484596 KLHL1Q9NR64 748 aa6.35□□□□□ -1.39
UBR3-210ENST00000484596 A0A1W2PS18 150 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 OR2M5A3KFT3 312 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 DVL1O14640 695 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 EIF3DO15371 548 aaKnown RBP eCLIP6.34□□□□□ -1.39
UBR3-210ENST00000484596 GM2AP17900 193 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 AHRP35869 848 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 CD81P60033 236 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 EEF1A2Q05639 463 aaKnown RBP6.34□□□□□ -1.39
UBR3-210ENST00000484596 CDC37Q16543 378 aaPredicted RBP6.34□□□□□ -1.39
UBR3-210ENST00000484596 SLC10A5Q5PT55 438 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 TMEM211Q6ICI0 200 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 BBS10Q8TAM1 723 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 GDAP1Q8TB36 358 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 ABHD8Q96I13 439 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 SLC22A12Q96S37 553 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 MOV10L1Q9BXT6 1211 aaKnown RBP6.34□□□□□ -1.39
UBR3-210ENST00000484596 RALYQ9UKM9 306 aaKnown RBP6.34□□□□□ -1.39
UBR3-210ENST00000484596 KIF21BO75037 1637 aa6.34□□□□□ -1.39
UBR3-210ENST00000484596 NOTCH4Q99466 2003 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 CARMIL1Q5VZK9 1371 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 ASTN2O75129 1339 aaPredicted RBP6.33□□□□□ -1.4
UBR3-210ENST00000484596 TRAV34A0A0B4J273 112 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 ARHGEF37A1IGU5 675 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 SMTNL1A8MU46 457 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 BMP10O95393 424 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 HOXC8P31273 242 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 KRT2P35908 639 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 CDH13P55290 713 aa6.33□□□□□ -1.4
UBR3-210ENST00000484596 PITX1P78337 314 aaPredicted RBP6.33□□□□□ -1.4
UBR3-210ENST00000484596 GAGE5Q13069 117 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms