RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ACTRT1Q8TDG2 376 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 LCN9Q8WX39 176 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 KLHL6Q8WZ60 621 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 TFGQ92734 400 aaPredicted RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 TEFMQ96QE5 360 aaKnown RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 TTC1Q99614 292 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 RAB33BQ9H082 229 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 DDX47Q9H0S4 455 aaKnown RBP11.95□□□□□ -0.5
MSH5-216ENST00000484309 SRMSQ9H3Y6 488 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 IL1RAPL1Q9NZN1 696 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 SOX13Q9UN79 622 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 ANKRD12Q6UB98 2062 aa11.95□□□□□ -0.5
MSH5-216ENST00000484309 PCM1Q15154 2024 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 GOLGA6L10A0A0M3HER8 536 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 SLC5A10A0PJK1 596 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 TLCD2A6NGC4 264 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 QSOX1O00391 747 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 BTN3A3O00478 584 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 BTN3A1O00481 513 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 TOX3O15405 576 aaPredicted RBP11.94□□□□□ -0.5
MSH5-216ENST00000484309 VAPBO95292 243 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 LIFP15018 202 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 FOLR1P15328 257 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 NELFEP18615 380 aaKnown RBP11.94□□□□□ -0.5
MSH5-216ENST00000484309 ARNTP27540 789 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 CCR7P32248 378 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 CD151P48509 253 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 ARL4DP49703 201 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 EIF3BP55884 814 aaKnown RBP11.94□□□□□ -0.5
MSH5-216ENST00000484309 GNG11P61952 73 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 CDK16Q00536 496 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 PRKAA1Q13131 559 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 RPA4Q13156 261 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 TAF1BQ53T94 588 aaPredicted RBP11.94□□□□□ -0.5
MSH5-216ENST00000484309 AARS2Q5JTZ9 985 aaKnown RBP11.94□□□□□ -0.5
MSH5-216ENST00000484309 PCSK4Q6UW60 755 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 VRK3Q8IV63 474 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 UNC5BQ8IZJ1 945 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 ZFPM2Q8WW38 1151 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 PEX13Q92968 403 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 ZNF669Q96BR6 464 aaPredicted RBP11.94□□□□□ -0.5
MSH5-216ENST00000484309 KIFC1Q9BW19 673 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 ULBP3Q9BZM4 244 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 KLHL25Q9H0H3 589 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 CIDEBQ9UHD4 219 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 PILRAQ9UKJ1 303 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 PLAGL1Q9UM63 463 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 ASF1AQ9Y294 204 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 TDRKHQ9Y2W6 561 aaKnown RBP11.94□□□□□ -0.5
MSH5-216ENST00000484309 NEU2Q9Y3R4 380 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 FER1L5A0AVI2 2057 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 CCDC88CQ9P219 2028 aa11.94□□□□□ -0.5
MSH5-216ENST00000484309 PIEZO2Q9H5I5 2752 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 LOC400499M0QZD8 3231 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 LOC101059948A0A1B0GTJ6 334 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 EIF4E1BA6NMX2 242 aaKnown RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 AP3B1O00203 1094 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 PRMT5O14744 637 aaPredicted RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 ATXN7O15265 892 aaPredicted RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 NDUFS3O75489 264 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 KIAA0754O94854 1291 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 TIAF1O95411 115 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 GSTM1P09488 218 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 CDH3P22223 829 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 PPARGP37231 505 aaPredicted RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 MAGEA6P43360 314 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 FNTAP49354 379 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 TTPAP49638 278 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 SARNPP82979 210 aaKnown RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 GSTM4Q03013 218 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 HSPA14Q0VDF9 509 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 TUBB3Q13509 450 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 PPP1R7Q15435 360 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 GPR19Q15760 415 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 PTRHD1Q6GMV3 140 aaKnown RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 NLGN4XQ8N0W4 816 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 GALNT6Q8NCL4 622 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 NLGN4YQ8NFZ3 816 aaPredicted RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 CFAP61Q8NHU2 1237 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 GRK7Q8WTQ7 553 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 SLC39A7Q92504 469 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 UBXN4Q92575 508 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 FAM136AQ96C01 138 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 SLC41A2Q96JW4 573 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 SERPINB12Q96P63 405 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 ZPBPQ9BS86 351 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 SPRY4Q9C004 299 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 MVB12BQ9H7P6 319 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 MRM3Q9HC36 420 aaKnown RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 SOHLH2Q9NX45 425 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 LNPEPQ9UIQ6 1025 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 TSR3Q9UJK0 312 aaKnown RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 POMT2Q9UKY4 750 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 ICKQ9UPZ9 632 aa11.93□□□□□ -0.5
MSH5-216ENST00000484309 TMEM184BQ9Y519 407 aaPredicted RBP11.93□□□□□ -0.5
MSH5-216ENST00000484309 SLC9B1P1A6NJY1 282 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 CES2O00748 559 aa11.92□□□□□ -0.5
MSH5-216ENST00000484309 DLGAP3O95886 979 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms