RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 IGF2RP11717 2491 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 CHD6Q8TD26 2715 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 A4D1N5 150 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM90A18PA6NE21 464 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM90A16PA6NEW6 464 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 LIPT2A6NK58 231 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM90A9PA6NNJ1 464 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM90A5PA8MXJ8 464 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 UBXN8O00124 270 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 LEFTY2O00292 366 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 EIF3DO15371 548 aaKnown RBP eCLIP6.55□□□□□ -1.36
CLK1-212ENST00000482590 ALDH1A2O94788 518 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM90A15PP0C7V4 464 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM90A14PP0C7W9 464 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 MYBL1P10243 752 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 DLATP10515 647 aaKnown RBP6.55□□□□□ -1.36
CLK1-212ENST00000482590 MBL2P11226 248 aaPredicted RBP6.55□□□□□ -1.36
CLK1-212ENST00000482590 TNNI1P19237 187 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 SYT1P21579 422 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 WARSP23381 471 aaKnown RBP6.55□□□□□ -1.36
CLK1-212ENST00000482590 LMAN1P49257 510 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 CLK3P49761 638 aaKnown RBP6.55□□□□□ -1.36
CLK1-212ENST00000482590 ASIC1P78348 528 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 DMTNQ08495 405 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 EIF2B5Q13144 721 aaKnown RBP6.55□□□□□ -1.36
CLK1-212ENST00000482590 RPA4Q13156 261 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 IRF3Q14653 427 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 NFIL3Q16649 462 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 SOWAHAQ2M3V2 549 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 MDH1BQ5I0G3 518 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 C9orf152Q5JTZ5 239 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 DAB2IPQ5VWQ8 1189 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 PMS2CLQ68D20 193 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM173BQ6P4H8 233 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FAM171BQ6P995 826 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 LPCAT2Q7L5N7 544 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 TUSC5Q8IXB3 177 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 OR5B17Q8NGF7 314 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 ZCCHC10Q8TBK6 192 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FER1L6-AS2Q96M78 137 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 CEP295NLQ96MC4 621 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 NR1H4Q96RI1 486 aaPredicted RBP6.55□□□□□ -1.36
CLK1-212ENST00000482590 USP28Q96RU2 1077 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 SLC22A12Q96S37 553 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 CYP2S1Q96SQ9 504 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 PKMYT1Q99640 499 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 SNX25Q9H3E2 840 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 NCOR1P1Q9H4R4 102 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 WDR26Q9H7D7 661 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 FBRSL1Q9HCM7 1045 aaKnown RBP6.55□□□□□ -1.36
CLK1-212ENST00000482590 GCNT4Q9P109 453 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 MMP17Q9ULZ9 603 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 CACNA1EQ15878 2313 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 PCDH15Q96QU1 1955 aa6.55□□□□□ -1.36
CLK1-212ENST00000482590 F8VP50 259 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 SLC9A3R1O14745 358 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 MCF2LO15068 1137 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 DCLK1O15075 740 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 SCAMP1O15126 338 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 TGFB1I1O43294 461 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 RIPK2O43353 540 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 ATP2C2O75185 946 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 KCNK5O95279 499 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 CAVIN2O95810 425 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 FTCDO95954 541 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 APODP05090 189 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 TPOP07202 933 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 ANXA6P08133 673 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 PTAFRP25105 342 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 APOBEC3AP31941 199 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 OPRD1P41143 372 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 CASRP41180 1078 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 PPP3CCP48454 512 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 KCNJ5P48544 419 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 DHPSP49366 369 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 NOVA1P51513 510 aaKnown RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 KDSRQ06136 332 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 HABP2Q14520 560 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 SNRNP35Q16560 246 aaKnown RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 NTRK2Q16620 822 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 BTBD16Q32M84 506 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 KRBOX4Q5JUW0 171 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 COLEC12Q5KU26 742 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 N4BP2L1Q5TBK1 243 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 TCEAL6Q6IPX3 200 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 TRAPPC11Q7Z392 1133 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 RABEPKQ7Z6M1 372 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 DNAAF5Q86Y56 855 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 CBWD2Q8IUF1 395 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 FAM217AQ8IXS0 508 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 UNC5BQ8IZJ1 945 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 LILRA3Q8N6C8 439 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 ZBTB8BQ8NAP8 495 aaPredicted RBP6.54□□□□□ -1.36
CLK1-212ENST00000482590 MYCBPAPQ8TBZ2 947 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 CPT1BQ92523 772 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 TCEAL3Q969E4 200 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 DHX58Q96C10 678 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 PCED1BQ96HM7 432 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 HIST1H2AHQ96KK5 128 aa6.54□□□□□ -1.36
CLK1-212ENST00000482590 CNOT6LQ96LI5 555 aaKnown RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms