RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 OLIG1Q8TAK6 271 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 CD101Q93033 1021 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 MTERF3Q96E29 417 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 BTBD10Q9BSF8 475 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 LMF2Q9BU23 707 aaKnown RBP5.36□□□□□ -1.55
SF3B1-210ENST00000482158 FAM129AQ9BZQ8 928 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 DONSONQ9NYP3 566 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 NME7Q9Y5B8 376 aa5.36□□□□□ -1.55
SF3B1-210ENST00000482158 IGLV5-45A0A087WSX0 123 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 C16orf97H3BN30 126 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 PTGESO14684 152 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 CAPN9O14815 690 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 IPO8O15397 1037 aaKnown RBP5.35□□□□□ -1.55
SF3B1-210ENST00000482158 TSPAN1O60635 241 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 H1F0P07305 194 aaKnown RBP5.35□□□□□ -1.55
SF3B1-210ENST00000482158 CKMT2P17540 419 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 CYP11B2P19099 503 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 MARK3P27448 753 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 FMO5P49326 533 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 TPD52P55327 224 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-210ENST00000482158 HSPB3Q12988 150 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 MFAP5Q13361 173 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 CAMK2DQ13557 499 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 ARMC3Q5W041 872 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 SMIM29Q86T20 159 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 DCP1BQ8IZD4 617 aaKnown RBP5.35□□□□□ -1.55
SF3B1-210ENST00000482158 OR13A1Q8NGR1 328 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 CTAGE1Q96RT6 745 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 NAA11Q9BSU3 229 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-210ENST00000482158 VN1R1Q9GZP7 353 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 ERVMER34-1Q9H9K5 563 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 APOBEC3GQ9HC16 384 aaKnown RBP5.35□□□□□ -1.55
SF3B1-210ENST00000482158 Q9N2K0 584 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 PIH1D3Q9NQM4 214 aaKnown RBP5.35□□□□□ -1.55
SF3B1-210ENST00000482158 ZNF580Q9UK33 172 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 SMCHD1A6NHR9 2005 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 WDR81Q562E7 1941 aa5.35□□□□□ -1.55
SF3B1-210ENST00000482158 KIAA1210Q9ULL0 1709 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 A0A1W2PPQ1 181 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 BUB3O43684 328 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 XPNPEP2O43895 674 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 WDPCPO95876 746 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 F7P08709 466 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-210ENST00000482158 MPZP25189 248 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 RAB28P51157 221 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 COG2Q14746 738 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 PTPRCAPQ14761 206 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 ZNF672Q499Z4 452 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-210ENST00000482158 FAM133BQ5BKY9 247 aaKnown RBP5.34□□□□□ -1.55
SF3B1-210ENST00000482158 MDH1BQ5I0G3 518 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 PDSS1Q5T2R2 415 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 ARMC4Q5T2S8 1044 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 CHST3Q7LGC8 479 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 SLFN11Q7Z7L1 901 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 NFE4Q86UQ8 179 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 GPALPP1Q8IXQ4 340 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 MAB21L3Q8N8X9 362 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 SLC24A4Q8NFF2 622 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 FGFBP3Q8TAT2 258 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 RNF128Q8TEB7 428 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 ZNF653Q96CK0 615 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 HDAC11Q96DB2 347 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 FER1L6-AS2Q96M78 137 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 ARRDC1-AS1Q9H2J1 176 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 MYNNQ9NPC7 610 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 PTTG2Q9NZH5 202 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 SLC24A2Q9UI40 661 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 KCNG2Q9UJ96 466 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 GRIP1Q9Y3R0 1128 aa5.34□□□□□ -1.55
SF3B1-210ENST00000482158 MED19A0JLT2 244 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-210ENST00000482158 HYKKA2RU49 373 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 PRR32B1ATL7 298 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 OR52Z1P0C646 297 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 AMD1P17707 334 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 MSH3P20585 1137 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 ACHEP22303 614 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 HOXA1P49639 335 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-210ENST00000482158 TERF1P54274 439 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 GAS1P54826 345 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 DLX5P56178 289 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 ZNF718Q3SXZ3 478 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 FAM76BQ5HYJ3 339 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 CCDC186Q7Z3E2 898 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 TMPRSS11BQ86T26 416 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 MRPS27Q92552 414 aaKnown RBP5.33□□□□□ -1.56
SF3B1-210ENST00000482158 SLAMF9Q96A28 289 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 ALG14Q96F25 216 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 SCRN2Q96FV2 425 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 ZNF583Q96ND8 569 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 LRRC3BQ96PB8 259 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 NUP85Q9BW27 656 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 ZFP57Q9NU63 452 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 ZNF701Q9NV72 531 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-210ENST00000482158 SLC38A7Q9NVC3 462 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 LRWD1Q9UFC0 647 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 PADI2Q9Y2J8 665 aa5.33□□□□□ -1.56
SF3B1-210ENST00000482158 TSPY2A6NKD2 308 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 E9PI62 339 aa5.32□□□□□ -1.56
SF3B1-210ENST00000482158 PRKNO60260 465 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms