RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 MARK1Q9P0L2 795 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 IL36AQ9UHA7 158 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 ZMYM5Q9UJ78 669 aa14.18□□□□□ -0.14
CHD3-211ENST00000481999 KIF26AQ9ULI4 1882 aaPredicted RBP14.18□□□□□ -0.14
CHD3-211ENST00000481999 INPP4BO15327 924 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 CRCPO75575 148 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 HGFP14210 728 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 MAP7D1Q3KQU3 841 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 CHRDL2Q6WN34 429 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 TRIM74Q86UV6 250 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 ETFBKMTQ8IXQ9 262 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 LEMD2Q8NC56 503 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 BPIFB1Q8TDL5 484 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 EGFL8Q99944 293 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 SUN2Q9UH99 717 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 FBXO10Q9UK96 956 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 MUC3AQ02505 3323 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 C16orf96A6NNT2 1141 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 GPX3P22352 226 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 RPS3P23396 243 aaKnown RBP eCLIP14.17□□□□□ -0.14
CHD3-211ENST00000481999 NNMTP40261 264 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 NSG1P42857 185 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 SLC7A2P52569 658 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 LSAMPQ13449 338 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 KIF19Q2TAC6 998 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 C6orf10Q5SRN2 563 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 IRAK1BP1Q5VVH5 260 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 GOLGA7Q7Z5G4 137 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 CBARPQ8N350 705 aaPredicted RBP14.17□□□□□ -0.14
CHD3-211ENST00000481999 ZNF597Q96LX8 424 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 SAMD11Q96NU1 681 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 UHRF1Q96T88 793 aaPredicted RBP14.17□□□□□ -0.14
CHD3-211ENST00000481999 RPP25Q9BUL9 199 aaKnown RBP14.17□□□□□ -0.14
CHD3-211ENST00000481999 SLC2A11Q9BYW1 496 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 PLA2G2FQ9BZM2 168 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 IL1RL2Q9HB29 575 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 HPS4Q9NQG7 708 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 PCDHGB4Q9UN71 923 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 PCDHGB5Q9Y5G0 923 aa14.17□□□□□ -0.14
CHD3-211ENST00000481999 K7ESM1 405 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 OR7A17O14581 309 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 FFAR3O14843 346 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 GPR42O15529 346 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 ETS2P15036 469 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 DUSP6Q16828 381 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 HABP4Q5JVS0 413 aaKnown RBP14.16□□□□□ -0.14
CHD3-211ENST00000481999 PPP2R2DQ66LE6 453 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 MACC1Q6ZN28 852 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 DHFR2Q86XF0 187 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 MYO1HQ8N1T3 1032 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 LRTOMTQ8WZ04 291 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 PYCR2Q96C36 320 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 TMEM79Q9BSE2 394 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 FARSBQ9NSD9 589 aaKnown RBP14.16□□□□□ -0.14
CHD3-211ENST00000481999 PADI4Q9UM07 663 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 NUMA1Q14980 2115 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 SPINT1O43278 529 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 OR6B1O95007 311 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 PSMC3P17980 439 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 CD9P21926 228 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 FSHRP23945 695 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 KCNC3Q14003 757 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 MAP7Q14244 749 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 GK3PQ14409 553 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 GPR33Q49SQ1 333 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 PRMT9Q6P2P2 845 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 IYDQ6PHW0 289 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 SMARCD2Q92925 531 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 SLCO4A1Q96BD0 722 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 CHFRQ96EP1 664 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 PRPF18Q99633 342 aaKnown RBP14.16□□□□□ -0.14
CHD3-211ENST00000481999 HOPXQ9BPY8 73 aaPredicted RBP14.16□□□□□ -0.14
CHD3-211ENST00000481999 OSBPL11Q9BXB4 747 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 COQ10BQ9H8M1 238 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 ZDHHC3Q9NYG2 299 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 NDUFAF1Q9Y375 327 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 SNX13Q9Y5W8 968 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 LRRK1Q38SD2 2015 aa14.16□□□□□ -0.14
CHD3-211ENST00000481999 UPK3BL1B0FP48 263 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 UPK3BL2E5RIL1 263 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 STX16O14662 325 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 ESRRBO95718 433 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 CAPN1P07384 714 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 FCARP24071 287 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 WASP42768 502 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 ADRM1Q16186 407 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 FNDC3BQ53EP0 1204 aaKnown RBP14.15□□□□□ -0.14
CHD3-211ENST00000481999 BRAT1Q6PJG6 821 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 CYP2R1Q6VVX0 501 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 EP400NLQ6ZTU2 488 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 RETREG3Q86VR2 466 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 CHERPQ8IWX8 916 aaKnown RBP14.15□□□□□ -0.14
CHD3-211ENST00000481999 MIER2Q8N344 545 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 OR4F6Q8NGB9 312 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 OTUB2Q96DC9 234 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 SEMA6AQ9H2E6 1030 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 FAM83DQ9H4H8 585 aa14.15□□□□□ -0.14
CHD3-211ENST00000481999 NUP210Q8TEM1 1887 aaPredicted RBP14.15□□□□□ -0.14
CHD3-211ENST00000481999 SLC9A3R1O14745 358 aaPredicted RBP14.15□□□□□ -0.14
CHD3-211ENST00000481999 SGTAO43765 313 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms