RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 FAM83HQ6ZRV2 1179 aaPredicted RBP12.31□□□□□ -0.44
SIK3-209ENST00000480222 UBE2R2Q712K3 238 aaPredicted RBP12.31□□□□□ -0.44
SIK3-209ENST00000480222 CHST15Q7LFX5 561 aaPredicted RBP12.31□□□□□ -0.44
SIK3-209ENST00000480222 TMEFF1Q8IYR6 380 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 TCAIMQ8N3R3 496 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 FBXO39Q8N4B4 442 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 C1orf216Q8TAB5 229 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 EXT2Q93063 718 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 MECRQ9BV79 373 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 SLC12A9Q9BXP2 914 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 MANSC1Q9H8J5 431 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 PARVBQ9HBI1 364 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 MRPL40Q9NQ50 206 aaKnown RBP12.31□□□□□ -0.44
SIK3-209ENST00000480222 KLC4Q9NSK0 619 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 ZSCAN32Q9NX65 697 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 SUSD2Q9UGT4 822 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 PRKAB1Q9Y478 270 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 GPSM3Q9Y4H4 160 aa12.31□□□□□ -0.44
SIK3-209ENST00000480222 TP53BP1Q12888 1972 aaPredicted RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 CACNA1IQ9P0X4 2223 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 WDR91A4D1P6 747 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 TMEM114B3SHH9 223 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 UBXN8O00124 270 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 VILLO15195 856 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 FFAR2O15552 330 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 TNFP01375 233 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 FUCA1P04066 466 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 HIST1H2AGP0C0S8 130 aaPredicted RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 FGF3P11487 239 aaPredicted RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 HIST1H2ADP20671 130 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 BGNP21810 368 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 IDSP22304 550 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 MAP4P27816 1152 aaKnown RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 AVPR2P30518 371 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 HNMTP50135 292 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 AFF3P51826 1226 aaKnown RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 HK3P52790 923 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 ALDH18A1P54886 795 aaKnown RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 ILF3Q12906 894 aaKnown RBP eCLIP12.3□□□□□ -0.44
SIK3-209ENST00000480222 FZD2Q14332 565 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 SETDB1Q15047 1291 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 TEAD4Q15561 434 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 TTC19Q6DKK2 380 aaPredicted RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 METTL2BQ6P1Q9 378 aaKnown RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 SPNS2Q8IVW8 549 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 RGL4Q8IZJ4 473 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 DEFB119Q8N690 84 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 LILRA3Q8N6C8 439 aaPredicted RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 OR6Y1Q8NGX8 325 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 MAGEC3Q8TD91 643 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 MCOLN3Q8TDD5 553 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 UBTD2Q8WUN7 234 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 L3HYPDHQ96EM0 354 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 HIST1H2AHQ96KK5 128 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 HIST1H2AJQ99878 128 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 H2AFJQ9BTM1 129 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 TRMOQ9BU70 441 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 C1QTNF3Q9BXJ4 246 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 GSDMCQ9BYG8 508 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 MIR1-1HGQ9H1L0 117 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 KCNH6Q9H252 994 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 OSGEPL1Q9H4B0 414 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 TM7SF3Q9NS93 570 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 PSD3Q9NYI0 1048 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 NCKIPSDQ9NZQ3 722 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 CD274Q9NZQ7 290 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 SLC23A2Q9UGH3 650 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 TSR3Q9UJK0 312 aaKnown RBP12.3□□□□□ -0.44
SIK3-209ENST00000480222 ADAMTS6Q9UKP5 1117 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 DNAJC16Q9Y2G8 782 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 PCDHGA2Q9Y5H1 932 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 ZNF318Q5VUA4 2279 aa12.3□□□□□ -0.44
SIK3-209ENST00000480222 ZFC3H1O60293 1989 aaKnown RBP12.29□□□□□ -0.44
SIK3-209ENST00000480222 THADAQ6YHU6 1953 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 TLR4O00206 839 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 BCAT2O15382 392 aaPredicted RBP12.29□□□□□ -0.44
SIK3-209ENST00000480222 NPHS1O60500 1241 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 ANXA5P08758 320 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 NME1P15531 152 aaKnown RBP12.29□□□□□ -0.44
SIK3-209ENST00000480222 GNSP15586 552 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 ACADLP28330 430 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 PDHA2P29803 388 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 HOXD12P35452 270 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 RPIAP49247 311 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 NXPH1P58417 271 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 HERVK_113P63132 956 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 EIF2B5Q13144 721 aaKnown RBP12.29□□□□□ -0.44
SIK3-209ENST00000480222 PHKG1Q16816 387 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 PLK5Q496M5 336 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 SULT1C3Q6IMI6 304 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 TTC23LQ6PF05 361 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 WASH2PQ6VEQ5 465 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 HID1Q8IV36 788 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 DCUN1D3Q8IWE4 304 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 PHACTR4Q8IZ21 702 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 KIRREL3Q8IZU9 778 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 PTGR2Q8N8N7 351 aaPredicted RBP12.29□□□□□ -0.44
SIK3-209ENST00000480222 ZBTB44Q8NCP5 570 aa12.29□□□□□ -0.44
SIK3-209ENST00000480222 ATL1Q8WXF7 558 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms