RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 KLF11O14901 512 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
RPP40-205ENST00000479782 KLK8O60259 260 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 DLX3O60479 287 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 TRIM13O60858 407 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 SUPT3HO75486 399 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 IPO13O94829 963 aaKnown RBP13.86□□□□□ -0.19
RPP40-205ENST00000479782 CATP04040 527 aaKnown RBP13.86□□□□□ -0.19
RPP40-205ENST00000479782 S100BP04271 92 aaPredicted RBP13.86□□□□□ -0.19
RPP40-205ENST00000479782 RPN2P04844 631 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 SLC35G4P0C7Q5 338 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 NEFHP12036 1026 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 MTHFD2P13995 350 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 ITPKAP23677 461 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 ACADLP28330 430 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 HOXD12P35452 270 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 KCNC1P48547 511 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 AP1S2P56377 157 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 C21orf59P57076 290 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 NXPH1P58417 271 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 DNAJB13P59910 316 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 CDKL1Q00532 357 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 CTBSQ01459 385 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 ILF3Q12906 894 aaKnown RBP eCLIP13.86□□□□□ -0.19
RPP40-205ENST00000479782 PEAR1Q5VY43 1037 aaPredicted RBP13.86□□□□□ -0.19
RPP40-205ENST00000479782 LIPMQ5VYY2 423 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 PHACTR4Q8IZ21 702 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 FBXO15Q8NCQ5 510 aaPredicted RBP13.86□□□□□ -0.19
RPP40-205ENST00000479782 MCOLN3Q8TDD5 553 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 MECRQ9BV79 373 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 TMEM168Q9H0V1 697 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 OSGEPL1Q9H4B0 414 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 C11orf16Q9NQ32 467 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 CD274Q9NZQ7 290 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 KCNK6Q9Y257 313 aa13.86□□□□□ -0.19
RPP40-205ENST00000479782 WDR91A4D1P6 747 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 FAM86C2PA6NEL3 165 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 UBXN8O00124 270 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 FFAR2O15552 330 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 SNX2O60749 519 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 CSF2P04141 144 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 HIST1H2AGP0C0S8 130 aaPredicted RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 GFAPP14136 432 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 NME1P15531 152 aaKnown RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 HIST1H2ADP20671 130 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 MAP4P27816 1152 aaKnown RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 RPIAP49247 311 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 ALDH18A1P54886 795 aaKnown RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 NAA20P61599 178 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 ABRQ12979 859 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 UAP1L1Q3KQV9 507 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 ATG16L1Q676U5 607 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 CAPRIN2Q6IMN6 1127 aaKnown RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 WASH2PQ6VEQ5 465 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 RGS9BPQ6ZS82 235 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 RABEPKQ7Z6M1 372 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 RAB44Q7Z6P3 723 aaPredicted RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 SPATS2Q86XZ4 545 aaKnown RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 C10orf107Q8IVU9 208 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 FBXO39Q8N4B4 442 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 PDPRQ8NCN5 879 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 PPP1R14CQ8TAE6 165 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 MAGEC3Q8TD91 643 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 GPBAR1Q8TDU6 330 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 LRRC8CQ8TDW0 803 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 EXT2Q93063 718 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 HIST1H2AHQ96KK5 128 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 HIST1H2AJQ99878 128 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 H2AFJQ9BTM1 129 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 GSDMCQ9BYG8 508 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 WWP1Q9H0M0 922 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 MANSC1Q9H8J5 431 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 WASH6PQ9NQA3 447 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 DNAJC28Q9NX36 388 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 APOBEC3BQ9UH17 382 aaKnown RBP13.85□□□□□ -0.19
RPP40-205ENST00000479782 PILRBQ9UKJ0 227 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 PCOLCE2Q9UKZ9 415 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 PDE10AQ9Y233 779 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 PLEKHM1Q9Y4G2 1056 aa13.85□□□□□ -0.19
RPP40-205ENST00000479782 STX16-NPEPL1H3BU86 382 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 STX16O14662 325 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 C1orf105O95561 183 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 SERPINE1P05121 402 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 ANXA5P08758 320 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 FGF3P11487 239 aaPredicted RBP13.84□□□□□ -0.19
RPP40-205ENST00000479782 CTSEP14091 401 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 JUNDP17535 347 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 IMPDH1P20839 514 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 GRK2P25098 689 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 RPL10P27635 214 aaKnown RBP13.84□□□□□ -0.19
RPP40-205ENST00000479782 ACTR1BP42025 376 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 HALP42357 657 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 CSNK1EP49674 416 aaKnown RBP13.84□□□□□ -0.19
RPP40-205ENST00000479782 HNMTP50135 292 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 ACTR1AP61163 376 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 SIM2Q14190 667 aaPredicted RBP13.84□□□□□ -0.19
RPP40-205ENST00000479782 CHI3L2Q15782 390 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 PHKG1Q16816 387 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 PFKFB4Q16877 469 aa13.84□□□□□ -0.19
RPP40-205ENST00000479782 SULT1C3Q6IMI6 304 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms