RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 SPNS2Q8IVW8 549 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 LMNTD2Q8IXW0 634 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 FBXO39Q8N4B4 442 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 CFAP61Q8NHU2 1237 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 WDR36Q8NI36 951 aaKnown RBP18.39■□□□□ 0.53
AGRN-208ENST00000479707 FBXO25Q8TCJ0 367 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 LIN37Q96GY3 246 aaPredicted RBP18.39■□□□□ 0.53
AGRN-208ENST00000479707 TGM7Q96PF1 710 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 NRTNQ99748 197 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 DPYSL5Q9BPU6 564 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 HGH1Q9BTY7 390 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 EPB41L1Q9H4G0 881 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 KIR3DX1Q9H7L2 352 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 SLC17A6Q9P2U8 582 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 GALPQ9UBC7 116 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 TSR3Q9UJK0 312 aaKnown RBP18.39■□□□□ 0.53
AGRN-208ENST00000479707 CDYLQ9Y232 598 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 ASF1AQ9Y294 204 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 LOXL2Q9Y4K0 774 aa18.39■□□□□ 0.53
AGRN-208ENST00000479707 E5RI56 91 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 CAPN5O15484 640 aaPredicted RBP18.38■□□□□ 0.53
AGRN-208ENST00000479707 BRINP1O60477 761 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 GPC4O75487 556 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 THRAP10827 490 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 ACADLP28330 430 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 NDUFS1P28331 727 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 LSSP48449 732 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 PLOD1Q02809 727 aaPredicted RBP18.38■□□□□ 0.53
AGRN-208ENST00000479707 TMED2Q15363 201 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 STEAP4Q687X5 459 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 ZNF549Q6P9A3 640 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 ZDHHC24Q6UX98 284 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 CCDC25Q86WR0 208 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 OR4E2Q8NGC2 313 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 OR5AR1Q8NGP9 310 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 PYROXD1Q8WU10 500 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 ZCCHC14Q8WYQ9 949 aaKnown RBP18.38■□□□□ 0.53
AGRN-208ENST00000479707 CCDC68Q9H2F9 335 aa18.38■□□□□ 0.53
AGRN-208ENST00000479707 TDRKHQ9Y2W6 561 aaKnown RBP18.38■□□□□ 0.53
AGRN-208ENST00000479707 OR6C74A6NCV1 312 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 H3BMM5 538 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 PLD2O14939 933 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 KPNA5O15131 536 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 ITIH1P19827 911 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 ABCG1P45844 678 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 LEPRP48357 1165 aaKnown RBP18.37■□□□□ 0.53
AGRN-208ENST00000479707 ADARP55265 1226 aaKnown RBP18.37■□□□□ 0.53
AGRN-208ENST00000479707 CAV1Q03135 178 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 IRGCQ6NXR0 463 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 PLXDC1Q8IUK5 500 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 PALM2Q8IXS6 379 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 SLC22A15Q8IZD6 547 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 CEP112Q8N8E3 955 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 C2CD4AQ8NCU7 369 aaPredicted RBP18.37■□□□□ 0.53
AGRN-208ENST00000479707 ACVR1CQ8NER5 493 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 GABPB2Q8TAK5 448 aaPredicted RBP18.37■□□□□ 0.53
AGRN-208ENST00000479707 GSDMBQ8TAX9 411 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 SKA2Q8WVK7 121 aaPredicted RBP18.37■□□□□ 0.53
AGRN-208ENST00000479707 ZFPM2Q8WW38 1151 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 LCN9Q8WX39 176 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 PRR11Q96HE9 360 aaPredicted RBP18.37■□□□□ 0.53
AGRN-208ENST00000479707 CMKLR1Q99788 373 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 XKR8Q9H6D3 395 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 MVB12BQ9H7P6 319 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 PISDQ9UG56 409 aa18.37■□□□□ 0.53
AGRN-208ENST00000479707 DMGDHQ9UI17 866 aaKnown RBP18.37■□□□□ 0.53
AGRN-208ENST00000479707 TNFSF15O95150 251 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 CAPNS1P04632 268 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 JMJD7P0C870 316 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 GABRB3P28472 473 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 RBMS1P29558 406 aaKnown RBP18.36■□□□□ 0.53
AGRN-208ENST00000479707 CAPZBP47756 277 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 MAPK10P53779 464 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 PPP1CAP62136 330 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 TRA2AQ13595 282 aaKnown RBP eCLIP18.36■□□□□ 0.53
AGRN-208ENST00000479707 PLEKHS1Q5SXH7 462 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 TEDDM1Q5T9Z0 273 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 FAM92BQ6ZTR7 304 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 SIDT2Q8NBJ9 832 aaKnown RBP18.36■□□□□ 0.53
AGRN-208ENST00000479707 OR52E1Q8NGJ3 308 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 TRIT1Q9H3H1 467 aaKnown RBP18.36■□□□□ 0.53
AGRN-208ENST00000479707 HRASLS2Q9NWW9 162 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 AKAP7Q9P0M2 348 aaPredicted RBP18.36■□□□□ 0.53
AGRN-208ENST00000479707 PDP2Q9P2J9 529 aa18.36■□□□□ 0.53
AGRN-208ENST00000479707 EIF3HO15372 352 aaKnown RBP eCLIP18.35■□□□□ 0.53
AGRN-208ENST00000479707 KIF1CO43896 1103 aaKnown RBP18.35■□□□□ 0.53
AGRN-208ENST00000479707 RASSF9O75901 435 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 SLCO2B1O94956 709 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 AHSGP02765 367 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 CCL4P13236 92 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 POLR2CP19387 275 aaPredicted RBP18.35■□□□□ 0.53
AGRN-208ENST00000479707 SSTR1P30872 391 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 CSTF2P33240 577 aaKnown RBP eCLIP18.35■□□□□ 0.53
AGRN-208ENST00000479707 ETV5P41161 510 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 SEPHS1P49903 392 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 EIF3IQ13347 325 aaKnown RBP18.35■□□□□ 0.53
AGRN-208ENST00000479707 KLHL35Q6PF15 583 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 OOSP2Q86WS3 158 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 TBC1D21Q8IYX1 336 aa18.35■□□□□ 0.53
AGRN-208ENST00000479707 ZBTB2Q8N680 514 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms