RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TCP11X2Q5H9J9 407 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 EFHC1Q5JVL4 640 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 DCST1Q5T197 706 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 WBP2NLQ6ICG8 309 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 DENND5BQ6ZUT9 1274 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 AACSQ86V21 672 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 NRROSQ86YC3 692 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 CHERPQ8IWX8 916 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 GUF1Q8N442 669 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 NKAIN3Q8N8D7 197 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 TDRD5Q8NAT2 981 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 APPL2Q8NEU8 664 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 HM13Q8TCT9 377 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 MAGEC3Q8TD91 643 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 PGAP3Q96FM1 320 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 WBP1Q96G27 269 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 GRAMD2BQ96HH9 432 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 RADILQ96JH8 1075 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 CNDP2Q96KP4 475 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 RTN4RQ9BZR6 473 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 OR10A4Q9H209 315 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 MMP27Q9H306 513 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 RABEP2Q9H5N1 569 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 SEBOXQ9HB31 216 aaPredicted RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 GDE1Q9NZC3 331 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 PPIEQ9UNP9 301 aaKnown RBP3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZNF148Q9UQR1 794 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 INSRP06213 1382 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 SCN7AQ01118 1682 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 KDM3BQ7LBC6 1761 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 ARFGEF2Q9Y6D5 1785 aa3.96□□□□□ -1.78
CDC42BPA-212ENST00000478573 ZNF541Q9H0D2 1346 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 KIAA1551Q9HCM1 1747 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 ARFGEF1Q9Y6D6 1849 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 MYH14Q7Z406 1995 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 MRC1P22897 1456 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 NPC1L1Q9UHC9 1359 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 A0A0U1RQJ8 604 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 EIF4E1BA6NMX2 242 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 A8MXE2 369 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 PLRG1O43660 514 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 GH2P01242 217 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 UMODP07911 640 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 ABCB1P08183 1280 aaPredicted RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 SNRNP70P08621 437 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 UGT1A1P22309 533 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 EEF1DP29692 281 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 C21orf33P30042 268 aaPredicted RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 BDKRB2P30411 391 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 PPP5CP53041 499 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 RAD23AP54725 363 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 TUBA1BP68363 451 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 FOXM1Q08050 763 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 MVPQ14764 893 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 PSMD6Q15008 389 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 DLG2Q15700 870 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 C9orf152Q5JTZ5 239 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 SPECC1Q5M775 1068 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 NSUN5P2Q63ZY6 315 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 TYW3Q6IPR3 259 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 PAPD4Q6PIY7 484 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 SLC36A4Q6YBV0 504 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 TPRG1Q6ZUI0 275 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 PCDH20Q8N6Y1 951 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 SLC38A9Q8NBW4 561 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 MCUQ8NE86 351 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 RHBDF1Q96CC6 855 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 TXNDC15Q96J42 360 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 COG3Q96JB2 828 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 NODALQ96S42 347 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 KXD1Q9BQD3 176 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 SLC25A33Q9BSK2 321 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 SPATC1LQ9H0A9 340 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 DDX31Q9H8H2 851 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 PCDH9Q9HC56 1237 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 CCDC177Q9NQR7 707 aaPredicted RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 CRNNQ9UBG3 495 aaPredicted RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 DBNLQ9UJU6 430 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 TRPV2Q9Y5S1 764 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 CGNL1Q0VF96 1302 aa3.95□□□□□ -1.78
CDC42BPA-212ENST00000478573 CACNA1FO60840 1977 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 CACNA1SQ13698 1873 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 ANKRD36CQ5JPF3 1778 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 AFDNP55196 1824 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 A6NL46 340 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 MAGEB17A8MXT2 336 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 FAM90A26D6RGX4 464 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 NTN3O00634 580 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 KCNN4O15554 427 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 TBX10O75333 385 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 RSL1D1O76021 490 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 IGLV2-11P01706 119 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 CAPZA2P47755 286 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 CLCNKAP51800 687 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 TAS2R38P59533 333 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 UBXN2AP68543 259 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 SIRPAP78324 504 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 SNTB1Q13884 538 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 CTF1Q16619 201 aa3.94□□□□□ -1.78
CDC42BPA-212ENST00000478573 SYT16Q17RD7 645 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms