RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 NLE1Q9NVX2 485 aaPredicted RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 SNX7Q9UNH6 387 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 FARSAQ9Y285 508 aaKnown RBP14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 PADI2Q9Y2J8 665 aa14.05□□□□□ -0.16
SMARCE1-209ENST00000478349 BOD1L1Q8NFC6 3051 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 UBR5O95071 2799 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 TRBV5-4A0A0C4DH59 114 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 GOLGA6L6A8MZA4 724 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 C9J4A7 227 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 LDB2O43679 373 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 RAB40ALP0C0E4 278 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 SHMT2P34897 504 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 PPARGP37231 505 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 NSG1P42857 185 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 PGDP52209 483 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 SEMA5AQ13591 1074 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 ITIH4Q14624 930 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 LYPLAL1Q5VWZ2 237 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 SERPINA9Q86WD7 417 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 AMIGO1Q86WK6 493 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 HPS6Q86YV9 775 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 KLHDC8BQ8IXV7 354 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 GPR135Q8IZ08 494 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 EFCAB3Q8N7B9 438 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 LRRC57Q8N9N7 239 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 FAM71DQ8N9W8 422 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 ALG3Q92685 438 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 BAG1Q99933 345 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 FAM118BQ9BPY3 351 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 TSSK1BQ9BXA7 367 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 TLR10Q9BXR5 811 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 FRMD8P1Q9BZ68 369 aaPredicted RBP14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 POLG2Q9UHN1 485 aa14.04□□□□□ -0.16
SMARCE1-209ENST00000478349 GRID2IPA4D2P6 1211 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 SLC9B1P1A6NJY1 282 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 TMEM150CB9EJG8 249 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 E7EQ34 232 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 MEN1O00255 615 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 AP2A1O95782 977 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 CD63P08962 238 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 AGXTP21549 392 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 CA5AP35218 305 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 ARCN1P48444 511 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 RRADP55042 308 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 OLIG2Q13516 323 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 POU6F1Q14863 301 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 DENND5AQ6IQ26 1287 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 DNAAF3Q8N9W5 541 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 TFGQ92734 400 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 RNF31Q96EP0 1072 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 HGH1Q9BTY7 390 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 PITPNM3Q9BZ71 974 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 OR52A5Q9H2C5 316 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 FAM96AQ9H5X1 160 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 ACTR5Q9H9F9 607 aaPredicted RBP14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 SMARCAL1Q9NZC9 954 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 TLK1Q9UKI8 766 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 PCDHGB7Q9Y5F8 929 aa14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 PCDHGA9Q9Y5G4 932 aaKnown RBP14.03□□□□□ -0.16
SMARCE1-209ENST00000478349 HEATR9A2RTY3 570 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 RCCD1A6NED2 376 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 E7EVH7 732 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 SGTAO43765 313 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 KLHL41O60662 606 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 OR56A5P0C7T3 313 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 PRDX3P30048 256 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 STIP1P31948 543 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 LMAN1P49257 510 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 ITGA1P56199 1179 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 CDH17Q12864 832 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 GPS2Q13227 327 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 MSLNQ13421 630 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 BOP1Q14137 746 aaKnown RBP14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 SPARCL1Q14515 664 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 SEL1L2Q5TEA6 688 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 KCTD11Q693B1 232 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 PACS1Q6VY07 963 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 CERS6Q6ZMG9 384 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 ZNF517Q6ZMY9 492 aaPredicted RBP14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 NLRP9Q7RTR0 991 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 RAB43Q86YS6 212 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 DSELQ8IZU8 1212 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 OR52E1Q8NGJ3 308 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 COL26A1Q96A83 441 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 IP6K3Q96PC2 410 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 DHRS4Q9BTZ2 278 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 SLC25A23Q9BV35 468 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 NLNQ9BYT8 704 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 ASF1AQ9Y294 204 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 AP1M2Q9Y6Q5 423 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 DUSP10Q9Y6W6 482 aa14.02□□□□□ -0.17
SMARCE1-209ENST00000478349 CCDC78A2IDD5 438 aa14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 BTN3A1O00481 513 aa14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 IGHEP01854 428 aa14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 RPN2P04844 631 aa14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 FURINP09958 794 aa14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 MSNP26038 577 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 VARSP26640 1264 aaKnown RBP14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 FDFT1P37268 417 aa14.01□□□□□ -0.17
SMARCE1-209ENST00000478349 UBAP2LQ14157 1087 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms