RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ATXN3P54252 364 aaPredicted RBP4.66□□□□□ -1.66
VPS50-214ENST00000477935 TRAF2Q12933 501 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 TRAF3Q13114 568 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 KEAP1Q14145 624 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 TAF12Q16514 161 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 NADSYN1Q6IA69 706 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 RETSATQ6NUM9 610 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 MOB3CQ70IA8 216 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 RNF168Q8IYW5 571 aaPredicted RBP4.66□□□□□ -1.66
VPS50-214ENST00000477935 CLIP4Q8N3C7 705 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 FAM216AQ8WUB2 273 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 RUFY2Q8WXA3 655 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 ZBTB10Q96DT7 871 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 UBXN10Q96LJ8 280 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 MAP7D2Q96T17 732 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 TM6SF1Q9BZW5 370 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 CDT1Q9H211 546 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 UBN1Q9NPG3 1134 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 TMEM51Q9NW97 253 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 WWOXQ9NZC7 414 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 DNAJB4Q9UDY4 337 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 PCDHGB5Q9Y5G0 923 aa4.66□□□□□ -1.66
VPS50-214ENST00000477935 SPAG17Q6Q759 2223 aa4.65□□□□□ -1.66
VPS50-214ENST00000477935 ASCC3Q8N3C0 2202 aaKnown RBP4.65□□□□□ -1.66
VPS50-214ENST00000477935 ARHGAP10A1A4S6 786 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 MYBPHLA2RUH7 354 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 RRP8O43159 456 aaKnown RBP4.65□□□□□ -1.67
VPS50-214ENST00000477935 GP1BBP13224 206 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 MYF6P23409 242 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 RYKP34925 604 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 LIFRP42702 1097 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 PDLIM4P50479 330 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 MXI1P50539 228 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 NLRP11P59045 1033 aaKnown RBP4.65□□□□□ -1.67
VPS50-214ENST00000477935 NTHL1P78549 312 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.65□□□□□ -1.67
VPS50-214ENST00000477935 MAPK6Q16659 721 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 CCDC184Q52MB2 194 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 DCAF6Q58WW2 860 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 SPDYCQ5MJ68 293 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 MFSD6LQ8IWD5 586 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 MB21D2Q8IYB1 491 aaPredicted RBP4.65□□□□□ -1.67
VPS50-214ENST00000477935 METTL13Q8N6R0 699 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 ELP4Q96EB1 424 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 PCYT2Q99447 389 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 SLC25A33Q9BSK2 321 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 LRRCC1Q9C099 1032 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 GPR88Q9GZN0 384 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 CPVLQ9H3G5 476 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 TRPV4Q9HBA0 871 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 TMEM160Q9NX00 188 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 ANKRD10Q9NXR5 420 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 SLC9A2Q9UBY0 812 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 IL17BQ9UHF5 180 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 FBXW11Q9UKB1 542 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 AGO1Q9UL18 857 aaKnown RBP4.65□□□□□ -1.67
VPS50-214ENST00000477935 C2CD3Q4AC94 2353 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 C2orf16Q68DN1 1984 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 CNTNAP2Q9UHC6 1331 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 ITPR3Q14573 2671 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 NBPF19A0A087WUL8 3843 aa4.65□□□□□ -1.67
VPS50-214ENST00000477935 SHROOM3Q8TF72 1996 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 IGKV6D-21A0A0A0MT36 114 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 TRABD2BA6NFA1 517 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 TIMM23O14925 209 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 CHADO15335 359 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 EXTL3O43909 919 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 KCNJ13O60928 360 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 HMMRO75330 724 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 DDHD2O94830 711 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 VTNP04004 478 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 TFPIP10646 304 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 FGF3P11487 239 aaPredicted RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 FCGR1AP12314 374 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 DARSP14868 501 aaKnown RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 PTPN2P17706 415 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 SRD5A1P18405 259 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 CNTFP26441 200 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 C21orf33P30042 268 aaPredicted RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 PSMC2P35998 433 aaKnown RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 PGM1P36871 562 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 GPD2P43304 727 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 CXCR3P49682 368 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 ST3GAL1Q11201 340 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 BIRC3Q13489 604 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 ALX1Q15699 326 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 TAF1BQ53T94 588 aaPredicted RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 ZNF667Q5HYK9 610 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 FAM78AQ5JUQ0 283 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 PMS2CLQ68D20 193 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 TWF2Q6IBS0 349 aaKnown RBP4.64□□□□□ -1.67
VPS50-214ENST00000477935 Q6ZS52 159 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 RABEPKQ7Z6M1 372 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 IQCA1Q86XH1 822 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 CNNM3Q8NE01 707 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 CCDC26Q8TAB7 109 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 WASF1Q92558 559 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 SMARCD2Q92925 531 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 EXOC4Q96A65 974 aa4.64□□□□□ -1.67
VPS50-214ENST00000477935 TXNDC15Q96J42 360 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms