RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CAPZBP47756 277 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 CSE1LP55060 971 aaKnown RBP17.21■□□□□ 0.35
PTPN7-209ENST00000477554 VSNL1P62760 191 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 CLPPQ16740 277 aaPredicted RBP17.21■□□□□ 0.35
PTPN7-209ENST00000477554 PCID2Q5JVF3 399 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 LRRC8BQ6P9F7 803 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 AFTPHQ6ULP2 937 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 CEP128Q6ZU80 1094 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 VRK3Q8IV63 474 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 LMNTD1Q8N9Z9 388 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 PPHLN1Q8NEY8 458 aaKnown RBP17.21■□□□□ 0.35
PTPN7-209ENST00000477554 HM13Q8TCT9 377 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 C9orf72Q96LT7 481 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 FMO2Q99518 471 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 XAB2Q9HCS7 855 aaKnown RBP17.21■□□□□ 0.35
PTPN7-209ENST00000477554 ZDHHC18Q9NUE0 388 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 NFU1Q9UMS0 254 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 SSUH2Q9Y2M2 353 aa17.21■□□□□ 0.35
PTPN7-209ENST00000477554 TEX51A0A1B0GUA7 166 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 CFAP99D6REC4 459 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 KCNJ13O60928 360 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 BANF1O75531 89 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 MLNP12872 115 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 CSTF2P33240 577 aaKnown RBP eCLIP17.21■□□□□ 0.34
PTPN7-209ENST00000477554 ARL4CP56559 192 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 CXADRP78310 365 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 TRA2AQ13595 282 aaKnown RBP eCLIP17.21■□□□□ 0.34
PTPN7-209ENST00000477554 IRGCQ6NXR0 463 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 ZDHHC24Q6UX98 284 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 PACS1Q6VY07 963 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 KRT222Q8N1A0 295 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 AGBL5Q8NDL9 886 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 FCRL3Q96P31 734 aaPredicted RBP17.21■□□□□ 0.34
PTPN7-209ENST00000477554 SIDT1Q9NXL6 827 aaKnown RBP17.21■□□□□ 0.34
PTPN7-209ENST00000477554 SLC39A1Q9NY26 324 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 SLC24A2Q9UI40 661 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 RIMKLBQ9ULI2 386 aa17.21■□□□□ 0.34
PTPN7-209ENST00000477554 FAM208BQ5VWN6 2430 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 IGHV5-51A0A0C4DH38 117 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 ZW10O43264 779 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 SLC35G4P0C7Q5 338 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 TPBGLP0DKB5 382 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 PRKG2Q13237 762 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 COL9A2Q14055 689 aaPredicted RBP17.2■□□□□ 0.34
PTPN7-209ENST00000477554 KCNAB1Q14722 419 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 HIF1AQ16665 826 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 ARHGAP40Q5TG30 622 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 PDIK1LQ8N165 341 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 SERPINB12Q96P63 405 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 KIFC1Q9BW19 673 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 PHACTR1Q9C0D0 580 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 XKR8Q9H6D3 395 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 ACSL5Q9ULC5 683 aa17.2■□□□□ 0.34
PTPN7-209ENST00000477554 UQCRHLA0A096LP55 91 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 UQCRHP07919 91 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 ECHS1P30084 290 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 CCR7P32248 378 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 NSG1P42857 185 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 PRAMEP78395 509 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 ITIH4Q14624 930 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 PLCL1Q15111 1095 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 ZNF789Q5FWF6 425 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 DTX1Q86Y01 620 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 OR4E2Q8NGC2 313 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 ELMO1Q92556 727 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 TMEM159Q96B96 161 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 ELMO2Q96JJ3 720 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 PWWP2AQ96N64 755 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 TAAR9Q96RI9 348 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 MAP3K3Q99759 626 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 IL22Q9GZX6 179 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 KIR3DX1Q9H7L2 352 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 CATSPERZQ9NTU4 200 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 CIDEBQ9UHD4 219 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 ACSL6Q9UKU0 697 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 SOX13Q9UN79 622 aa17.19■□□□□ 0.34
PTPN7-209ENST00000477554 C17orf113A0A1B0GUU1 675 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 KRT87PA6NCN2 255 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 OR6C74A6NCV1 312 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 EIF3HO15372 352 aaKnown RBP eCLIP17.18■□□□□ 0.34
PTPN7-209ENST00000477554 CD3EAPO15446 510 aaKnown RBP17.18■□□□□ 0.34
PTPN7-209ENST00000477554 ERLIN1O75477 346 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 VAPBO95292 243 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 ZNF28P17035 718 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 MLLT3P42568 568 aaPredicted RBP17.18■□□□□ 0.34
PTPN7-209ENST00000477554 NPY2RP49146 381 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 BOP1Q14137 746 aaKnown RBP17.18■□□□□ 0.34
PTPN7-209ENST00000477554 FASTKD1Q53R41 847 aaKnown RBP17.18■□□□□ 0.34
PTPN7-209ENST00000477554 DNAJC21Q5F1R6 531 aaKnown RBP17.18■□□□□ 0.34
PTPN7-209ENST00000477554 PCSK4Q6UW60 755 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 CENPUQ71F23 418 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 TIPARPQ7Z3E1 657 aaKnown RBP17.18■□□□□ 0.34
PTPN7-209ENST00000477554 PLXDC1Q8IUK5 500 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 UNC5BQ8IZJ1 945 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 AVL9Q8NBF6 648 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 OR5AR1Q8NGP9 310 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 HEXDCQ8WVB3 486 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 FERD3LQ96RJ6 166 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 DPYSL5Q9BPU6 564 aa17.18■□□□□ 0.34
PTPN7-209ENST00000477554 HGH1Q9BTY7 390 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms