RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 GPX3P22352 226 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 STX5Q13190 355 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 TCEA2Q15560 299 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 ELMSAN1Q6PJG2 1045 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 CHSY3Q70JA7 882 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 DHDDSQ86SQ9 333 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 PIP4K2CQ8TBX8 421 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 ULK4Q96C45 1275 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 LMLNQ96KR4 655 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 TMEM74Q96NL1 305 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 FAF1Q9UNN5 650 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-221ENST00000477203 PRRT4C9JH25 899 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 TAPBPO15533 448 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 MT-ND1P03886 318 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 CYP17A1P05093 508 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 PRDX6P30041 224 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 SPINT3P49223 89 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 DDX39BQ13838 428 aaKnown RBP13.14□□□□□ -0.31
HDAC7-221ENST00000477203 GRM2Q14416 872 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 GSTA3Q16772 222 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 FNDC3BQ53EP0 1204 aaKnown RBP13.14□□□□□ -0.31
HDAC7-221ENST00000477203 SFT2D3Q587I9 215 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 CDC26Q8NHZ8 85 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 ELMO1Q92556 727 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 ZNF707Q96C28 371 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-221ENST00000477203 DCUN1D1Q96GG9 259 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 HEPHQ9BQS7 1158 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 STK39Q9UEW8 545 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 PRKAB1Q9Y478 270 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 POLR3HQ9Y535 204 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-221ENST00000477203 PCDHB1Q9Y5F3 818 aa13.14□□□□□ -0.31
HDAC7-221ENST00000477203 OR7A17O14581 309 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 SLC2A4P14672 509 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 DGKAP23743 735 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 AQP4P55087 323 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 RABL3Q5HYI8 236 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 PSRC1Q6PGN9 363 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 ADAMTSL2Q86TH1 951 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 C17orf50Q8WW18 174 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 GFM2Q969S9 779 aaKnown RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 KLHL4Q9C0H6 718 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 LIN28AQ9H9Z2 209 aaKnown RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 RPL26L1Q9UNX3 145 aaKnown RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 WDR87Q6ZQQ6 2873 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 TRPM6Q9BX84 2022 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 LOC730098B7Z3J9 87 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 HSPA1AP0DMV8 641 aaKnown RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 HSPA1BP0DMV9 641 aaKnown RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 CDK4P11802 303 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 MAPK8P45983 427 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 RPIAP49247 311 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 RPL38P63173 70 aaKnown RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 PTGR1Q14914 329 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 UBE2R2Q712K3 238 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 FAM83DQ9H4H8 585 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 OPTCQ9UBM4 332 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 CROTQ9UKG9 612 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 ADH5P11766 374 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 NCK1P16333 377 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 VCLP18206 1134 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 PCSK6P29122 969 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 HOXD12P35452 270 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 RFTN2Q52LD8 501 aaPredicted RBP13.13□□□□□ -0.31
HDAC7-221ENST00000477203 TMEM53Q6P2H8 277 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 AMIGO2Q86SJ2 522 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 SFRP1Q8N474 314 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 SLC25A23Q9BV35 468 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 AURKCQ9UQB9 309 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
HDAC7-221ENST00000477203 ZFC3H1O60293 1989 aaKnown RBP13.12□□□□□ -0.31
HDAC7-221ENST00000477203 ZNF839A8K0R7 811 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 K7ESM1 405 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 SCAMP1O15126 338 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 STAMBPO95630 424 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 NFKBIAP25963 317 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 NSG1P42857 185 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 LRP8Q14114 963 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 SF1Q15637 639 aaKnown RBP13.12□□□□□ -0.31
HDAC7-221ENST00000477203 FAM78AQ5JUQ0 283 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 IL23RQ5VWK5 629 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 KLHL35Q6PF15 583 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 Q6ZSR9 355 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-221ENST00000477203 PHYKPLQ8IUZ5 450 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 C2orf73Q8N5S3 287 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-221ENST00000477203 PPWD1Q96BP3 646 aaKnown RBP13.12□□□□□ -0.31
HDAC7-221ENST00000477203 ZDHHC3Q9NYG2 299 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 MAP10Q9P2G4 905 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 LAMA1P25391 3075 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 FADS2P1A8MWK0 482 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 H3BNX3 289 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 PABPC4LP0CB38 370 aaKnown RBP13.12□□□□□ -0.31
HDAC7-221ENST00000477203 UROSP10746 265 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 G6PDP11413 515 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 TIMP2P16035 220 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 CTSCP53634 463 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 ST8SIA6P61647 398 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 AP5B1Q2VPB7 878 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 ATP6AP1LQ52LC2 224 aa13.12□□□□□ -0.31
HDAC7-221ENST00000477203 PAGE3Q5JUK9 113 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms