RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 SRMSQ9H3Y6 488 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 COG4Q9H9E3 785 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 POMT2Q9UKY4 750 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 R3HDM2Q9Y2K5 976 aaKnown RBP11.33□□□□□ -0.6
VARS2-208ENST00000477052 AAR2Q9Y312 384 aaKnown RBP11.33□□□□□ -0.6
VARS2-208ENST00000477052 PRSS21Q9Y6M0 314 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 COLEC10Q9Y6Z7 277 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 PCSK5Q92824 1860 aa11.33□□□□□ -0.6
VARS2-208ENST00000477052 TCRBV7S2A1N4TA0A589 114 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 BLACEA4D250 179 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 GRID2IPA4D2P6 1211 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 TTLL8A6PVC2 850 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 AGAP14A8MT82 685 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 MASP2O00187 686 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 MEN1O00255 615 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 HCRTR1O43613 425 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 STK10O94804 968 aaKnown RBP11.32□□□□□ -0.6
VARS2-208ENST00000477052 RALBP11234 206 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 CYLC1P35663 651 aaPredicted RBP11.32□□□□□ -0.6
VARS2-208ENST00000477052 GDF10P55107 478 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 ITGA1P56199 1179 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 RWDD2BP57060 319 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 COPS2P61201 443 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 PRKAA1Q13131 559 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 DEFB110Q30KQ9 67 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 ZNF658BQ4V348 819 aaPredicted RBP11.32□□□□□ -0.6
VARS2-208ENST00000477052 CCDC38Q502W7 563 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 PRR30Q53SZ7 412 aaPredicted RBP11.32□□□□□ -0.6
VARS2-208ENST00000477052 ZNF789Q5FWF6 425 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 TMTC4Q5T4D3 741 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 CYB5D1Q6P9G0 228 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 SNX20Q7Z614 316 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 SYVN1Q86TM6 617 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 APLFQ8IW19 511 aaPredicted RBP11.32□□□□□ -0.6
VARS2-208ENST00000477052 CCDC170Q8IYT3 715 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 LMNTD1Q8N9Z9 388 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 ACVR1CQ8NER5 493 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 OR52E1Q8NGJ3 308 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 FCRL4Q96PJ5 515 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 CCM2Q9BSQ5 444 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 SLC25A23Q9BV35 468 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 GPR87Q9BY21 358 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 ING2Q9H160 280 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 RBSNQ9H1K0 784 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 ACSS2Q9NR19 701 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 ZDHHC3Q9NYG2 299 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 PLAGL1Q9UM63 463 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 BTRCQ9Y297 605 aa11.32□□□□□ -0.6
VARS2-208ENST00000477052 EPN1Q9Y6I3 576 aaPredicted RBP11.32□□□□□ -0.6
VARS2-208ENST00000477052 CLEC18AA5D8T8 446 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ZNF185O15231 689 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 CAPN1P07384 714 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 CYP2A7P20853 494 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 GNLYP22749 145 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ACRV1P26436 265 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 RORAP35398 523 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 PGDP52209 483 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 CSE1LP55060 971 aaKnown RBP11.31□□□□□ -0.6
VARS2-208ENST00000477052 DBN1Q16643 649 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 C1orf189Q5VU69 101 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 FAM198BQ6UWH4 519 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 CLEC18BQ6UXF7 455 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ARHGEF18Q6ZSZ5 1173 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 CDHR3Q6ZTQ4 885 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 BPHLQ86WA6 291 aaPredicted RBP11.31□□□□□ -0.6
VARS2-208ENST00000477052 FAM20CQ8IXL6 584 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ADGRF3Q8IZF5 1079 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 DSELQ8IZU8 1212 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 CLEC18CQ8NCF0 446 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 OR5AR1Q8NGP9 310 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ZFPM2Q8WW38 1151 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ULK4Q96C45 1275 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 TRAPPC9Q96Q05 1148 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ACTR5Q9H9F9 607 aaPredicted RBP11.31□□□□□ -0.6
VARS2-208ENST00000477052 FAM60AQ9NP50 221 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 PCMTD2Q9NV79 361 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 SMARCAL1Q9NZC9 954 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 CIDEBQ9UHD4 219 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 SNX7Q9UNH6 387 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 ICKQ9UPZ9 632 aa11.31□□□□□ -0.6
VARS2-208ENST00000477052 USP9XQ93008 2570 aaPredicted RBP11.31□□□□□ -0.6
VARS2-208ENST00000477052 IGLV3-16A0A075B6K0 115 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 TRBV5-4A0A0C4DH59 114 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 IFRD1O00458 451 aaPredicted RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 ZNF749O43361 778 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 TJP3O95049 919 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 FTCDO95954 541 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 KLK3P07288 261 aaPredicted RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 TPBGLP0DKB5 382 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 NDUFS1P28331 727 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 PTPN7P35236 360 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 HADHAP40939 763 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 ZNF75DP51815 510 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 ATP1A4Q13733 1029 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 SLC9A5Q14940 896 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 ZIC1Q15915 447 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 KCTD19Q17RG1 926 aaPredicted RBP11.3□□□□□ -0.6
VARS2-208ENST00000477052 IZUMO3Q5VZ72 239 aa11.3□□□□□ -0.6
VARS2-208ENST00000477052 KCTD11Q693B1 232 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms