RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ACP2P11117 423 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 PLA2G2AP14555 144 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 CBLP22681 906 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 AZGP1P25311 298 aaKnown RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 HOXC13P31276 330 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 COPB2P35606 906 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 AHRP35869 848 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 TPD52P55327 224 aaPredicted RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 NANOS2P60321 138 aaKnown RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 PRKCZQ05513 592 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 MZT1Q08AG7 82 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 TUBB2AQ13885 445 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 KIR2DS5Q14953 304 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 FAM171BQ6P995 826 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 ZNF517Q6ZMY9 492 aaPredicted RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 MFSD6Q6ZSS7 791 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 ARMC9Q7Z3E5 817 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 ADCK2Q7Z695 626 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 RBM23Q86U06 439 aaKnown RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 SPATA2LQ8IUW3 424 aaPredicted RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 MFN1Q8IWA4 741 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 TTC30BQ8N4P2 665 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 L3MBTL4Q8NA19 623 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 SETD6Q8TBK2 473 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 MR1Q95460 341 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 MTERF3Q96E29 417 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 CPNE1Q99829 537 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 THUMPD3Q9BV44 507 aaKnown RBP5.65□□□□□ -1.5
VPS50-212ENST00000476413 TUBB2BQ9BVA1 445 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 TRPC7Q9HCX4 862 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 ACKR4Q9NPB9 350 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 MALT1Q9UDY8 824 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 PADI2Q9Y2J8 665 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 POMT1Q9Y6A1 747 aa5.65□□□□□ -1.5
VPS50-212ENST00000476413 SYNCRIPO60506 623 aaKnown RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 NTN1O95631 604 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 TFAP2AP05549 437 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 KRT19P08727 400 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 DAOP14920 347 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 CSF2RAP15509 400 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 CD22P20273 847 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 MCCP23508 829 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 CTNNA1P35221 906 aaKnown RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 CDKN2AP42771 156 aaKnown RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 TNNT3P45378 269 aaPredicted RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 FUT6P51993 359 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 ZRANB3Q5FWF4 1079 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 PET117Q6UWS5 81 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 DET1Q7L5Y6 550 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 CRYBG2Q8N1P7 616 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 CPSF7Q8N684 471 aaKnown RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 RTP4Q96DX8 246 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 LINGO1Q96FE5 620 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 OTUB1Q96FW1 271 aaPredicted RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 RMDN2Q96LZ7 410 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 CITED2Q99967 270 aaPredicted RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 GPATCH1Q9BRR8 931 aaKnown RBP5.64□□□□□ -1.51
VPS50-212ENST00000476413 TMEM204Q9BSN7 226 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 ARRDC1-AS1Q9H2J1 176 aa5.64□□□□□ -1.51
VPS50-212ENST00000476413 HYKKA2RU49 373 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 C15orf62A8K5M9 175 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 CLDN4O14493 209 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 TGDSO95455 350 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 BMP15O95972 392 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 ZFYP08048 801 aaPredicted RBP5.63□□□□□ -1.51
VPS50-212ENST00000476413 TCF4P15884 667 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 ADRA2CP18825 462 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 KRT2P35908 639 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 PRKCIP41743 596 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 PSMC4P43686 418 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 SLC9A3P48764 834 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 EEF1A1P68104 462 aaKnown RBP5.63□□□□□ -1.51
VPS50-212ENST00000476413 RPL24P83731 157 aaKnown RBP5.63□□□□□ -1.51
VPS50-212ENST00000476413 MAT1AQ00266 395 aaKnown RBP5.63□□□□□ -1.51
VPS50-212ENST00000476413 NDUFAF5Q5TEU4 345 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 EEF1A1P5Q5VTE0 462 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 C9orf57Q5W0N0 161 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS50-212ENST00000476413 C16orf82Q7Z2V1 217 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 PIWIL4Q7Z3Z4 852 aaKnown RBP5.63□□□□□ -1.51
VPS50-212ENST00000476413 SPATA19Q7Z5L4 167 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 ABI3BPQ7Z7G0 1075 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 TLK2Q86UE8 772 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 SFR1Q86XK3 245 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 OCC1Q8TAD7 63 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 CORO2AQ92828 525 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 ATP6V1E2Q96A05 226 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 SFXN2Q96NB2 322 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 INTS14Q96SY0 518 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 KATNB1Q9BVA0 655 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 VN1R1Q9GZP7 353 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 LRWD1Q9UFC0 647 aa5.63□□□□□ -1.51
VPS50-212ENST00000476413 ZFP37Q9Y6Q3 630 aaPredicted RBP5.63□□□□□ -1.51
VPS50-212ENST00000476413 IGHV4OR15-8A0A075B7B6 117 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 NEMP2A6NFY4 417 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 ENO4A6NNW6 628 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 OVOL3O00110 214 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 TULP2O00295 520 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 PSMD14O00487 310 aa5.62□□□□□ -1.51
VPS50-212ENST00000476413 ACSL3O95573 720 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms