RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 BRCC3P46736 316 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 CD47Q08722 323 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 CBX2Q14781 532 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 KIF19Q2TAC6 998 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 LAIR1Q6GTX8 287 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 PTRH1Q86Y79 214 aaKnown RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 ATPAF2Q8N5M1 289 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 RTL3Q8N8U3 475 aaKnown RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 CHDHQ8NE62 594 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 TRPV3Q8NET8 790 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ABHD16BQ9H3Z7 469 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 DSN1Q9H410 356 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 AGO1Q9UL18 857 aaKnown RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 SNX6Q9UNH7 406 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ZNF106Q9H2Y7 1883 aaKnown RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 M0QX08 132 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 UBXN8O00124 270 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 MATN4O95460 622 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 CYP11A1P05108 521 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 PCMT1P22061 227 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 GSTM2P28161 218 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 MRPL19P49406 292 aaKnown RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 NRG1Q02297 640 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 EMX1Q04741 257 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 LAPTM4AQ15012 233 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 GDPD3Q7L5L3 318 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 TFAP2DQ7Z6R9 452 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 DCP2Q8IU60 420 aaKnown RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 HID1Q8IV36 788 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 RIMKLAQ8IXN7 391 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 CLEC4FQ8N1N0 589 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 SPERTQ8NA61 448 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 KLHDC9Q8NEP7 349 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 OR52K2Q8NGK3 314 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 OSCP1Q8WVF1 389 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 MUL1Q969V5 352 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ROPN1LQ96C74 230 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 HMCESQ96FZ2 354 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 SMIM14Q96QK8 99 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 SLC25A23Q9BV35 468 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 MFSD1Q9H3U5 465 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ACTL8Q9H568 366 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ZBTB20Q9HC78 741 aaPredicted RBP8.25□□□□□ -1.09
VAPB-205ENST00000476395 CD320Q9NPF0 282 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 C14orf119Q9NWQ9 140 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 ACTL7AQ9Y615 435 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 MAU2Q9Y6X3 613 aa8.25□□□□□ -1.09
VAPB-205ENST00000476395 A0A0U1RQS6 177 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 SLC12A8A0AV02 714 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 A8MX80 341 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 SLC7A4O43246 635 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 ANXA9O76027 345 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 PAPSS2O95340 614 aaPredicted RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 TSPAN12O95859 305 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 LHX1P48742 406 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 SCNN1GP51170 649 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 CHRNEQ04844 493 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 CCL14Q16627 93 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 PAN2Q504Q3 1202 aaKnown RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 XKR7Q5GH72 579 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 GLRX5Q86SX6 157 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 TMEM86AQ8N2M4 240 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 PACRGLQ8N7B6 248 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 OR6F1Q8NGZ6 308 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 CYP2S1Q96SQ9 504 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 COQ7Q99807 217 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 FEM1AQ9BSK4 669 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 SLIRPQ9GZT3 109 aaKnown RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 C6orf62Q9GZU0 229 aaPredicted RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 SLC25A51Q9H1U9 297 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 AGO3Q9H9G7 860 aaKnown RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 M0QZQ0 153 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 PSMD3O43242 534 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 UPK1BO75841 260 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 ALX3O95076 343 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 BMP1P13497 986 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 GLULP15104 373 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 ZNF37AP17032 561 aaPredicted RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 CD6P30203 668 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 FMO3P31513 532 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 CD86P42081 329 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 PSEN2P49810 448 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 CLCN5P51795 746 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 ARSFP54793 590 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 GEMP55040 296 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 TPD52P55327 224 aaPredicted RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 MGAT3Q09327 533 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 SMN1Q16637 294 aaKnown RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 VARS2Q5ST30 1063 aaKnown RBP8.24□□□□□ -1.09
VAPB-205ENST00000476395 MORN1Q5T089 497 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 OR10Q1Q8NGQ4 319 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 TWIST2Q8WVJ9 160 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 FAR1Q8WVX9 515 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 FATE1Q969F0 183 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 NRBF2Q96F24 287 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 NEDD4LQ96PU5 975 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 FAM105AQ9NUU6 356 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 ERVK-18Q9QC07 812 aa8.24□□□□□ -1.09
VAPB-205ENST00000476395 EIF3LQ9Y262 564 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms