RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 SOX13Q9UN79 622 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 PIEZO2Q9H5I5 2752 aa20.59■□□□□ 0.89
LIME1-204ENST00000476183 TLCD2A6NGC4 264 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 IQCF5A8MTL0 148 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 STK17BO94768 372 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 POLR2CP19387 275 aaPredicted RBP20.58■□□□□ 0.89
LIME1-204ENST00000476183 CCR7P32248 378 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 FNTAP49354 379 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 PRKG2Q13237 762 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 KCNAB1Q14722 419 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 AARS2Q5JTZ9 985 aaKnown RBP20.58■□□□□ 0.89
LIME1-204ENST00000476183 ZNF449Q6P9G9 518 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 FBXO38Q6PIJ6 1188 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 CACNA2D3Q8IZS8 1091 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 OR52E1Q8NGJ3 308 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 LCN9Q8WX39 176 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 UBXN4Q92575 508 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 CD180Q99467 661 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 TRIM56Q9BRZ2 755 aaKnown RBP20.58■□□□□ 0.89
LIME1-204ENST00000476183 HGH1Q9BTY7 390 aa20.58■□□□□ 0.89
LIME1-204ENST00000476183 TMEM184BQ9Y519 407 aaPredicted RBP20.58■□□□□ 0.89
LIME1-204ENST00000476183 GOLGA8KD6RF30 607 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 GOLGA8TH3BQL2 631 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 BTN3A3O00478 584 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 ATXN7O15265 892 aaPredicted RBP20.57■□□□□ 0.88
LIME1-204ENST00000476183 VAPBO95292 243 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 DLGAP3O95886 979 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 FOLR1P15328 257 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 ZNF28P17035 718 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 ATP1A2P50993 1020 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 CSE1LP55060 971 aaKnown RBP20.57■□□□□ 0.88
LIME1-204ENST00000476183 RHDQ02161 417 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 IL22RA1Q8N6P7 574 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 OR5AR1Q8NGP9 310 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 TTC9Q92623 222 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 ELMO2Q96JJ3 720 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 SRMSQ9H3Y6 488 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 TFB2MQ9H5Q4 396 aaKnown RBP20.57■□□□□ 0.88
LIME1-204ENST00000476183 XKR8Q9H6D3 395 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 ANAPC5Q9UJX4 755 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 PCDHGA4Q9Y5G9 962 aa20.57■□□□□ 0.88
LIME1-204ENST00000476183 UBA6A0AVT1 1052 aaPredicted RBP20.56■□□□□ 0.88
LIME1-204ENST00000476183 GOLGA8MH3BSY2 632 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 BTN3A1O00481 513 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 PRMT5O14744 637 aaPredicted RBP20.56■□□□□ 0.88
LIME1-204ENST00000476183 PPARGP37231 505 aaPredicted RBP20.56■□□□□ 0.88
LIME1-204ENST00000476183 TTPAP49638 278 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 SARNPP82979 210 aaKnown RBP20.56■□□□□ 0.88
LIME1-204ENST00000476183 SYTL3Q4VX76 610 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 ARMC6Q6NXE6 501 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 VRK3Q8IV63 474 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 NLGN4XQ8N0W4 816 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 KRT222Q8N1A0 295 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 MCUQ8NE86 351 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 NLGN4YQ8NFZ3 816 aaPredicted RBP20.56■□□□□ 0.88
LIME1-204ENST00000476183 SERPINB12Q96P63 405 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 CARD6Q9BX69 1037 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 P2RY12Q9H244 342 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 POMT2Q9UKY4 750 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 CDYLQ9Y232 598 aa20.56■□□□□ 0.88
LIME1-204ENST00000476183 CFAP46Q8IYW2 2715 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 GOLGA6L10A0A0M3HER8 536 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 ERVH48-1M5A8F1 160 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 EBLN1P0CF75 366 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 TPBGLP0DKB5 382 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 FGF5P12034 268 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 MLNP12872 115 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 LIFP15018 202 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 TCP1P17987 556 aaKnown RBP20.55■□□□□ 0.88
LIME1-204ENST00000476183 GNG11P61952 73 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 IL11RAQ14626 422 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 AGGF1Q8N302 714 aaeCLIP20.55■□□□□ 0.88
LIME1-204ENST00000476183 NAT8LQ8N9F0 302 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 SIDT2Q8NBJ9 832 aaKnown RBP20.55■□□□□ 0.88
LIME1-204ENST00000476183 GRK7Q8WTQ7 553 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 DDX47Q9H0S4 455 aaKnown RBP20.55■□□□□ 0.88
LIME1-204ENST00000476183 ICKQ9UPZ9 632 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 ASF1AQ9Y294 204 aa20.55■□□□□ 0.88
LIME1-204ENST00000476183 SPTBP11277 2137 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 LOC101059948A0A1B0GTJ6 334 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 F8W8V4 182 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 GPC4O75487 556 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 TIAF1O95411 115 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 MAP4P27816 1152 aaKnown RBP20.54■□□□□ 0.88
LIME1-204ENST00000476183 PLOD1Q02809 727 aaPredicted RBP20.54■□□□□ 0.88
LIME1-204ENST00000476183 HSPA14Q0VDF9 509 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 PRKAA1Q13131 559 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 TUBB3Q13509 450 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 PAPD7Q5XG87 772 aaKnown RBP20.54■□□□□ 0.88
LIME1-204ENST00000476183 KIAA0930Q6ICG6 404 aaPredicted RBP20.54■□□□□ 0.88
LIME1-204ENST00000476183 CASC4Q6P4E1 433 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 AMIGO1Q86WK6 493 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 KMT5CQ86Y97 462 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 TBC1D21Q8IYX1 336 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 SLC22A15Q8IZD6 547 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 ADGRF3Q8IZF5 1079 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 UNC5BQ8IZJ1 945 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 D2HGDHQ8N465 521 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 SLC39A7Q92504 469 aa20.54■□□□□ 0.88
LIME1-204ENST00000476183 ULBP3Q9BZM4 244 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms