RNA–Protein interactions for RNA: ENST00000475818.5

HDAC11-217, Transcript of histone deacetylase 11, humanhuman

TSL 3

Gene HDAC11, Length 1,271 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-217ENST00000475818 DNMT3AQ9Y6K1 912 aaPredicted RBP19.58■□□□□ 0.72
HDAC11-217ENST00000475818 COLEC10Q9Y6Z7 277 aa19.58■□□□□ 0.72
HDAC11-217ENST00000475818 FER1L5A0AVI2 2057 aa19.58■□□□□ 0.72
HDAC11-217ENST00000475818 TACC2O95359 2948 aa19.58■□□□□ 0.72
HDAC11-217ENST00000475818 DNHD1Q96M86 4753 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 MATN2O00339 956 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 OR2B3O76000 313 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 NDUFS1P28331 727 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 UBE2HP62256 183 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 SLC10A2Q12908 348 aaPredicted RBP19.57■□□□□ 0.72
HDAC11-217ENST00000475818 PIGHQ14442 188 aaPredicted RBP19.57■□□□□ 0.72
HDAC11-217ENST00000475818 PPP2R5EQ16537 467 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 LDLRAP1Q5SW96 308 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 GPRC6AQ5T6X5 926 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 MRPL14Q6P1L8 145 aaKnown RBP19.57■□□□□ 0.72
HDAC11-217ENST00000475818 NT5DC3Q86UY8 548 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 OR1N1Q8NGS0 311 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 ENOX1Q8TC92 643 aaKnown RBP19.57■□□□□ 0.72
HDAC11-217ENST00000475818 AGAP3Q96P47 875 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 CBX8Q9HC52 389 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 FAM60AQ9NP50 221 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 FANCLQ9NW38 375 aa19.57■□□□□ 0.72
HDAC11-217ENST00000475818 HCRTR1O43613 425 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 CTSBP07858 339 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 CD63P08962 238 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 MX2P20592 715 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 AKT1P31749 480 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 ARSEP51690 589 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 NOMO1Q15155 1222 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 NKAIN1Q4KMZ8 207 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 ATP13A4Q4VNC1 1196 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 ZNF324BQ6AW86 544 aaPredicted RBP19.56■□□□□ 0.72
HDAC11-217ENST00000475818 RHBDD2Q6NTF9 364 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 ZNF571Q7Z3V5 609 aaPredicted RBP19.56■□□□□ 0.72
HDAC11-217ENST00000475818 TRIM73Q86UV7 250 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 LILRA3Q8N6C8 439 aaPredicted RBP19.56■□□□□ 0.72
HDAC11-217ENST00000475818 DDHD1Q8NEL9 900 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 ACVR1CQ8NER5 493 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 FAM71BQ8TC56 605 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 CPLX3Q8WVH0 158 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 HDAC11Q96DB2 347 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 IMP4Q96G21 291 aaKnown RBP19.56■□□□□ 0.72
HDAC11-217ENST00000475818 AP1M1Q9BXS5 423 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 XPO4Q9C0E2 1151 aaKnown RBP19.56■□□□□ 0.72
HDAC11-217ENST00000475818 HAUS4Q9H6D7 363 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 CDC23Q9UJX2 597 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 ACSL5Q9ULC5 683 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 AP1M2Q9Y6Q5 423 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 CNTRLQ7Z7A1 2325 aa19.56■□□□□ 0.72
HDAC11-217ENST00000475818 MGAT4DA6NG13 374 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 C19orf84I3L1E1 186 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 DDX3XO00571 662 aaKnown RBP eCLIP19.55■□□□□ 0.72
HDAC11-217ENST00000475818 KCNN4O15554 427 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 SPAM1P38567 509 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 IFI35P80217 286 aaPredicted RBP19.55■□□□□ 0.72
HDAC11-217ENST00000475818 SRSF11Q05519 484 aaKnown RBP19.55■□□□□ 0.72
HDAC11-217ENST00000475818 CCDC70Q6NSX1 233 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 DCHS2Q6V1P9 2916 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 RPTNQ6XPR3 784 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 DAAM2Q86T65 1068 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 ZNF655Q8N720 491 aaPredicted RBP19.55■□□□□ 0.72
HDAC11-217ENST00000475818 SPATA22Q8NHS9 363 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 PROKR1Q8TCW9 393 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 NR4A3Q92570 626 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 TRIM11Q96F44 468 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 TAAR6Q96RI8 345 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 ERGIC2Q96RQ1 377 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 TXLNGQ9NUQ3 528 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 IRAK4Q9NWZ3 460 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 CCDC88CQ9P219 2028 aa19.55■□□□□ 0.72
HDAC11-217ENST00000475818 BUD23O43709 281 aaKnown RBP19.54■□□□□ 0.72
HDAC11-217ENST00000475818 UNC5CO95185 931 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 NADKO95544 446 aaPredicted RBP19.54■□□□□ 0.72
HDAC11-217ENST00000475818 NDST3O95803 873 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 MYBL1P10243 752 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 GZMAP12544 262 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 MSH3P20585 1137 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 ASIC2Q16515 512 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 LONRF2Q1L5Z9 754 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 TMEM207Q6UWW9 146 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 PQLC3Q8N755 202 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.54■□□□□ 0.72
HDAC11-217ENST00000475818 OR2L2Q8NH16 312 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 THOC3Q96J01 351 aaKnown RBP19.54■□□□□ 0.72
HDAC11-217ENST00000475818 FERD3LQ96RJ6 166 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 LHPPQ9H008 270 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 XKR8Q9H6D3 395 aa19.54■□□□□ 0.72
HDAC11-217ENST00000475818 GLYATL1P3A0A0U1RQE8 302 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 LRRC53A6NM62 1247 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 H3BMH7 237 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 SOCS6O14544 535 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 ZSCAN9O15535 394 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-217ENST00000475818 PMPCBO75439 489 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 CAPN3P20807 821 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 MMP11P24347 488 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 CT47A1Q5JQC4 288 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-217ENST00000475818 RPUSD3Q6P087 351 aaKnown RBP19.53■□□□□ 0.72
HDAC11-217ENST00000475818 MTFR2Q6P444 385 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 ISLR2Q6UXK2 745 aa19.53■□□□□ 0.72
HDAC11-217ENST00000475818 CPNE8Q86YQ8 564 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms