RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 PRAMEF11O60813 436 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 EML2O95834 649 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 CLPTM1O96005 669 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 EDN1P05305 212 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 LDHCP07864 332 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 CSH1P0DML2 217 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 CSH2P0DML3 217 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 GJA1P17302 382 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 SAT1P21673 171 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 CEACAM8P31997 349 aaPredicted RBP5.78□□□□□ -1.48
SMC5-203ENST00000475540 LGALS3BPQ08380 585 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 WTAPQ15007 396 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 MDH1BQ5I0G3 518 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 HYIQ5T013 277 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 DHRS7BQ6IAN0 325 aaPredicted RBP5.78□□□□□ -1.48
SMC5-203ENST00000475540 LINGO4Q6UY18 593 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 MCUQ8NE86 351 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 DDHD1Q8NEL9 900 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 NEK1Q96PY6 1258 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 ASCL2Q99929 193 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 RHCGQ9UBD6 479 aa5.78□□□□□ -1.48
SMC5-203ENST00000475540 IGLV9-49A0A0B4J1Y8 123 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 CYSRT1A8MQ03 144 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 E9PI62 339 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 NRIP1P48552 1158 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 NR1D2Q14995 579 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 IGSF11Q5DX21 431 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 GRTP1Q5TC63 336 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 KRT79Q5XKE5 535 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 PAPD5Q8NDF8 572 aaKnown RBP5.77□□□□□ -1.49
SMC5-203ENST00000475540 OR1J1Q8NGS3 322 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 RNF128Q8TEB7 428 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 HSD17B8Q92506 261 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 NSUN4Q96CB9 384 aaKnown RBP5.77□□□□□ -1.49
SMC5-203ENST00000475540 CALML4Q96GE6 196 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 PAFAH2Q99487 392 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 TEX12Q9BXU0 123 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 ADD3Q9UEY8 706 aaKnown RBP5.77□□□□□ -1.49
SMC5-203ENST00000475540 NRBP1Q9UHY1 535 aa5.77□□□□□ -1.49
SMC5-203ENST00000475540 FBXO2Q9UK22 296 aaPredicted RBP5.77□□□□□ -1.49
SMC5-203ENST00000475540 LOC100509620A0A075B734 347 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 hCG_1807616A0A1W2PRN6 198 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 SH2B2O14492 632 aaPredicted RBP5.76□□□□□ -1.49
SMC5-203ENST00000475540 PIGNO95427 931 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 FRMD6-AS1P0C7T7 363 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 CEACAM1P13688 526 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 ZNF26P17031 533 aaPredicted RBP5.76□□□□□ -1.49
SMC5-203ENST00000475540 ACSL1P33121 698 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 PNRC1Q12796 327 aaPredicted RBP5.76□□□□□ -1.49
SMC5-203ENST00000475540 EPS8Q12929 822 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 GTDC1Q4AE62 458 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 FFAR4Q5NUL3 377 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 KBTBD6Q86V97 674 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 MOSPD2Q8NHP6 518 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 GIMAP5Q96F15 307 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 CDRT15Q96T59 188 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 MMP27Q9H306 513 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 WSB2Q9NYS7 404 aaPredicted RBP5.76□□□□□ -1.49
SMC5-203ENST00000475540 TBC1D29Q9UFV1 150 aa5.76□□□□□ -1.49
SMC5-203ENST00000475540 PTRH2Q9Y3E5 179 aaKnown RBP5.76□□□□□ -1.49
SMC5-203ENST00000475540 ZNF541Q9H0D2 1346 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 HEPACAM2A8MVW5 462 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 DNM1LO00429 736 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 XRCC3O43542 346 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 CREG1O75629 220 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 NGFP01138 241 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 HMBSP08397 361 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 GABRA5P31644 462 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 SNX16P57768 344 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 CDK3Q00526 305 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 CUL4AQ13619 759 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 FCN2Q15485 313 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 TAF13Q15543 124 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 C15orf59Q2T9L4 293 aaPredicted RBP5.75□□□□□ -1.49
SMC5-203ENST00000475540 DCAF10Q5QP82 559 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 LCE1EQ5T753 118 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 ARHGEF16Q5VV41 709 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 FIGLAQ6QHK4 219 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 FBXO39Q8N4B4 442 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 ZNF383Q8NA42 475 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 JAKMIP2Q96AA8 810 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 FNDC11Q9BVV2 318 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 FLRT3Q9NZU0 649 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 OSGIN1Q9UJX0 560 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 DISP3Q9P2K9 1392 aa5.75□□□□□ -1.49
SMC5-203ENST00000475540 SOS1Q07889 1333 aaPredicted RBP5.74□□□□□ -1.49
SMC5-203ENST00000475540 IGKV3D-15A0A087WSY6 115 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 TIMM44O43615 452 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 ZNF500O60304 480 aaPredicted RBP5.74□□□□□ -1.49
SMC5-203ENST00000475540 TSPAN1O60635 241 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 PRKRAO75569 313 aaKnown RBP5.74□□□□□ -1.49
SMC5-203ENST00000475540 TRIM21P19474 475 aaKnown RBP5.74□□□□□ -1.49
SMC5-203ENST00000475540 KCTD2Q14681 263 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 MEA1Q16626 185 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 MZT2BQ6NZ67 158 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 COMMD2Q86X83 199 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 FAM114A1Q8IWE2 563 aa5.74□□□□□ -1.49
SMC5-203ENST00000475540 CCDC89Q8N998 374 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms