RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 SLC2A3P11169 496 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 IL7P13232 177 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 IL7RP16871 459 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 FASP25445 335 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SSTR4P31391 388 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SPAM1P38567 509 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 BAG6P46379 1132 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 RAD23AP54725 363 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 EEF1A2Q05639 463 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 ACSM1Q08AH1 577 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 LTB4RQ15722 352 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TYSND1Q2T9J0 566 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 KIF19Q2TAC6 998 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TTLL9Q3SXZ7 439 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 WDR44Q5JSH3 913 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 LDLRAP1Q5SW96 308 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 LGSNQ5TDP6 509 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ZDHHC17Q8IUH5 632 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CCDC103Q8IW40 242 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PM20D2Q8IYS1 436 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 OFCC1Q8IZS5 231 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TNS4Q8IZW8 715 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ZNF567Q8N184 647 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 DNAJC22Q8N4W6 341 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 DNAJC5GQ8N7S2 189 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 OR10T2Q8NGX3 314 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 GABPB2Q8TAK5 448 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 MCOLN3Q8TDD5 553 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TMBIM1Q969X1 311 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CCDC124Q96CT7 223 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 TRNT1Q96Q11 434 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 NELL2Q99435 816 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 BARD1Q99728 777 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 OMDQ99983 421 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 MTG1Q9BT17 334 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 SNRNP25Q9BV90 132 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 AS3MTQ9HBK9 375 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 POLE4Q9NR33 117 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CDH10Q9Y6N8 788 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TYW5A2RUC4 315 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 PRAMEF25A6NGN4 478 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 KPNA7A9QM74 516 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 STX16O14662 325 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PCDHGA12O60330 932 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SCN2BO60939 215 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 SRP72O76094 671 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 MLYCDO95822 493 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 PFKLP17858 780 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 FGFR3P22607 806 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CCNCP24863 283 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 MAS1LP35410 378 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 NPY2RP49146 381 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 HOXA1P49639 335 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 AIF1P55008 147 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 OR4D2P58180 307 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 DSTNP60981 165 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 BTG1P62324 171 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ESRRGP62508 458 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CSNK2BP67870 215 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ABATP80404 500 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 RGS1Q08116 209 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TRPC3Q13507 836 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 LAMC2Q13753 1193 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 GRM3Q14832 879 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CSRP2Q16527 193 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 AANATQ16613 207 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ZNF528Q3MIS6 628 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 BCL7AQ4VC05 210 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 NOL9Q5SY16 702 aaKnown RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 WDR78Q5VTH9 848 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 TMEM81Q6P7N7 255 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 DPP8Q6V1X1 898 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 FAM183BPQ6ZVS7 135 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 UNC93AQ86WB7 457 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ZNF444Q8N0Y2 327 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 LILRB2Q8N423 598 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 AADATQ8N5Z0 425 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 OR11H4Q8NGC9 324 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 RPS4Y2Q8TD47 263 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 GTF2H4Q92759 462 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 NTAN1Q96AB6 310 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 CPPED1Q9BRF8 314 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 MFRPQ9BY79 579 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 RNF32Q9H0A6 362 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 RACGAP1Q9H0H5 632 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 FZD8Q9H461 694 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 IKZF5Q9H5V7 419 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 AKTIPQ9H8T0 292 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ZBTB20Q9HC78 741 aaPredicted RBP4.03□□□□□ -1.76
USP16-205ENST00000474835 ISYNA1Q9NPH2 558 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 RGS18Q9NS28 235 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 GLTPQ9NZD2 209 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ERVK-18Q9QC07 812 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 DNAJB9Q9UBS3 223 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 KCND3Q9UK17 655 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 BCS1LQ9Y276 419 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 USTQ9Y2C2 406 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 ASB4Q9Y574 426 aa4.03□□□□□ -1.76
USP16-205ENST00000474835 DDTLA6NHG4 134 aaPredicted RBP4.02□□□□□ -1.77
USP16-205ENST00000474835 LOC110117498-PIK3R3F6TDL0 507 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms