RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PLK4O00444 970 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PER2O15055 1255 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 LSM1O15116 133 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 GLUD1P00367 558 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CAPN1P07384 714 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PCMT1P22061 227 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TGM1P22735 817 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PPIBP23284 216 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 DGKAP23743 735 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PSMB9P28065 219 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 OR1E1P30953 314 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 DNAJA1P31689 397 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 IDUAP35475 653 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 GSSP48637 474 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 MTPNP58546 118 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PHC1P78364 1004 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZNF33BQ06732 778 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 NPTX1Q15818 432 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 DDR2Q16832 855 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TTLL9Q3SXZ7 439 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 NOMO2Q5JPE7 1267 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SLX4IPQ5VYV7 408 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 GPR142Q7Z601 462 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 LDB1Q86U70 411 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 HORMAD1Q86X24 394 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 DCP2Q8IU60 420 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 PGBD3Q8N328 593 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 RHOXF1Q8NHV9 184 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 MCFD2Q8NI22 146 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CHAC2Q8WUX2 184 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 FAR1Q8WVX9 515 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TMEM40Q8WWA1 233 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 HPS1Q92902 700 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ULK4Q96C45 1275 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 YIPF6Q96EC8 236 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 KLHL5Q96PQ7 755 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PARK7Q99497 189 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 MGME1Q9BQP7 344 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 HEPHQ9BQS7 1158 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CORO1BQ9BR76 489 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TMEM165Q9HC07 324 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SPON1Q9HCB6 807 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 UBA2Q9UBT2 640 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 GIMAP2Q9UG22 337 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 EIF2B4Q9UI10 523 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 FAM50BQ9Y247 325 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 MAN2B2Q9Y2E5 1009 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PTGDR2Q9Y5Y4 395 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PEX16Q9Y5Y5 336 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ARL5AQ9Y689 179 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZFC3H1O60293 1989 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 OR51F1A6NGY5 319 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PTGES3LE9PB15 166 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 LOC110117498-PIK3R3F6TDL0 507 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 H0Y858 1186 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 H7C0S8 307 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PRMT5O14744 637 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 TNFRSF10BO14763 440 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 MSI1O43347 362 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 MAN1A2O60476 641 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 FOXD2O60548 495 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 G6PDP11413 515 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ZNF7P17097 686 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 S100A3P33764 101 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SOX6P35712 828 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PPP3CCP48454 512 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 NEK2P51955 445 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CACNG1Q06432 222 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 LRRC74AQ0VAA2 488 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SMARCB1Q12824 385 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CSTF3Q12996 717 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 PROX2Q3B8N5 592 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 INO80DQ53TQ3 878 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 PAGE2BQ5JRK9 111 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PERM1Q5SV97 790 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CHST15Q7LFX5 561 aaPredicted RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 P3H2Q8IVL5 708 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SCN4BQ8IWT1 228 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TCAIMQ8N3R3 496 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 FAM110BQ8TC76 370 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 UBTD2Q8WUN7 234 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PIK3R3Q92569 461 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SLC10A4Q96EP9 437 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ITPAQ9BY32 194 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ATP13A3Q9H7F0 1226 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 SCUBE2Q9NQ36 999 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TLR9Q9NR96 1032 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 CCDC59Q9P031 241 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 GALPQ9UBC7 116 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 OPTCQ9UBM4 332 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 MKLN1Q9UL63 735 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 IFT52Q9Y366 437 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PKP3Q9Y446 797 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 NYNRINQ9P2P1 1898 aaKnown RBP6.01□□□□□ -1.45
HERC4-209ENST00000473533 CDC7O00311 574 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 TREHO43280 583 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 NUAK1O60285 661 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 PRMT3O60678 531 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 ULK1O75385 1050 aa6.01□□□□□ -1.45
HERC4-209ENST00000473533 UPK1BO75841 260 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms