RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 DPEP2Q9H4A9 486 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PLCB1Q9NQ66 1216 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PHPT1Q9NRX4 125 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 TRNAU1APQ9NX07 287 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 LRIT1Q9P2V4 623 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 UBA2Q9UBT2 640 aaPredicted RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 ZNF212Q9UDV6 495 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 DNAJC12Q9UKB3 198 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 G3BP2Q9UN86 482 aaKnown RBP3.49□□□□□ -1.85
XRN1-209ENST00000472625 EDARQ9UNE0 448 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 ASXL3Q9C0F0 2248 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 PLXNA2O75051 1894 aa3.49□□□□□ -1.85
XRN1-209ENST00000472625 NBPF19A0A087WUL8 3843 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 HECTD1Q9ULT8 2610 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 KNL1Q8NG31 2342 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 TMEM131Q92545 1883 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 NYNRINQ9P2P1 1898 aaKnown RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 PRAMEF33A0A0G2JMD5 474 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 UBE2QL1A1L167 161 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 C2CD4BA6NLJ0 364 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 CAPN14A8MX76 684 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 B4DGG1 531 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 GPR89AB7ZAQ6 455 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 GOLGA8SH3BPF8 625 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 MKRN2OSH3BPM6 223 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 RAD51BO15315 384 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 INPP4BO15327 924 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 TOX3O15405 576 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 DAPK3O43293 454 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 PRAMEF10O60809 474 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 GCATO75600 419 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 PALMO75781 387 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 PCCBP05166 539 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 PLEKP08567 350 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 GPR89BP0CG08 455 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 CYP2A6P11509 494 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 GP1BBP13224 206 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ATP1A3P13637 1013 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 CCNB1P14635 433 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 UCHL3P15374 230 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ZNF30P17039 623 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 GPD1P21695 349 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ACRV1P26436 265 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ZFP36P26651 326 aaKnown RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 RFC1P35251 1148 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 PPM1FP49593 454 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 NUMBP49757 651 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 MAPK10P53779 464 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 POLE2P56282 527 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 STX17P56962 302 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 SESN2P58004 480 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 TPI1P60174 286 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 UBE2HP62256 183 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 NOMO3P69849 1222 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 SLC25A3Q00325 362 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 OCRLQ01968 901 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 TLE1Q04724 770 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 NSUN2Q08J23 767 aaKnown RBP eCLIP3.48□□□□□ -1.85
XRN1-209ENST00000472625 ABHD18Q0P651 414 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 C1orf61Q13536 156 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ZNF235Q14590 738 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 DRAP1Q14919 205 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 NUMA1Q14980 2115 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 CDO1Q16878 200 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 KLHDC7AQ5VTJ3 777 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 SPECC1LQ69YQ0 1117 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 TIGD7Q6NT04 549 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 DNAJC24Q6P3W2 148 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 DCUN1D2Q6PH85 259 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 Q6ZPA2 131 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 DPPA4Q7L190 304 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 RD3Q7Z3Z2 195 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 HPS6Q86YV9 775 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 CMTM4Q8IZR5 234 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 D2HGDHQ8N465 521 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 WDTC1Q8N5D0 677 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ESX1Q8N693 406 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 NLGN4YQ8NFZ3 816 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 OR52K2Q8NGK3 314 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 OR6K2Q8NGY2 324 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 C9orf43Q8TAL5 461 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 COG1Q8WTW3 980 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 FAM172AQ8WUF8 416 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 NEU4Q8WWR8 484 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 NUS1Q96E22 293 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 PDXPQ96GD0 296 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 SLC45A3Q96JT2 553 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 TTC1Q99614 292 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 HERPUD2Q9BSE4 406 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 TUBGCP2Q9BSJ2 902 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 CNPY3Q9BT09 278 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ANP32EQ9BTT0 268 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 SEMA4CQ9C0C4 833 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 CLPBQ9H078 707 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ZNF703Q9H7S9 590 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 ZWILCHQ9H900 591 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 GPN2Q9H9Y4 310 aaPredicted RBP3.48□□□□□ -1.85
XRN1-209ENST00000472625 PCDH12Q9NPG4 1184 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ADAM22Q9P0K1 906 aa3.48□□□□□ -1.85
XRN1-209ENST00000472625 ITM2BQ9Y287 266 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms