RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, human

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSR4-208	ENST00000471880	PEX13	Q92968	403 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	ZNF669	Q96BR6	464 aa	Predicted RBP	14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	MFSD3	Q96ES6	412 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	PDLIM2	Q96JY6	352 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	TEFM	Q96QE5	360 aa	Known RBP	14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	NAPG	Q99747	312 aa	Predicted RBP	14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	MAP3K3	Q99759	626 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	OR52A5	Q9H2C5	316 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	ZNF768	Q9H5H4	540 aa	Known RBP	14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	XKR8	Q9H6D3	395 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	ACSL6	Q9UKU0	697 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	PCDHGA3	Q9Y5H0	932 aa		14.42	□□□□□ -0.1
SSR4-208	ENST00000471880	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	IGHV5-51	A0A0C4DH38	117 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	TEX51	A0A1B0GUA7	166 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	CTAGE9	A4FU28	777 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	PFDN6	O15212	129 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	TOX3	O15405	576 aa	Predicted RBP	14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	STK17B	O94768	372 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	TMEM63A	O94886	807 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	PSMA3	P25788	255 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	CD151	P48509	253 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	FNTA	P49354	379 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	TMED2	Q15363	201 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	CYP1B1	Q16678	543 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	KIAA1614	Q5VZ46	1190 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	MRNIP	Q6NTE8	343 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	FBXO38	Q6PIJ6	1188 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	XKR5	Q6UX68	686 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	PRSS42	Q7Z5A4	293 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	OR52E1	Q8NGJ3	308 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	OR5AR1	Q8NGP9	310 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	UBXN4	Q92575	508 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	FAM136A	Q96C01	138 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	ULBP3	Q9BZM4	244 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	TRIT1	Q9H3H1	467 aa	Known RBP	14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	MVB12B	Q9H7P6	319 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	FBXO8	Q9NRD0	319 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	TREX1	Q9NSU2	369 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	EPHA6	Q9UF33	1036 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	LNPEP	Q9UIQ6	1025 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	GNPTG	Q9UJJ9	305 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	SOX13	Q9UN79	622 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	SSUH2	Q9Y2M2	353 aa		14.41	□□□□□ -0.1
SSR4-208	ENST00000471880	TLCD2	A6NGC4	264 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	SDR42E2	A6NKP2	422 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	CES2	O00748	559 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	PRMT5	O14744	637 aa	Predicted RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	MAP3K7	O43318	606 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	SNRNP200	O75643	2136 aa	Known RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	APOA4	P06727	396 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	EBLN1	P0CF75	366 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	SPTB	P11277	2137 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	FMO4	P31512	558 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	PAFAH1B1	P43034	410 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	ABR	Q12979	859 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	TUBB3	Q13509	450 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	THOC5	Q13769	683 aa	Known RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	DHX34	Q14147	1143 aa	Known RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	CYB5D1	Q6P9G0	228 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	AMIGO1	Q86WK6	493 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	NLGN4X	Q8N0W4	816 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	LKAAEAR1	Q8TD35	194 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	ZFPM2	Q8WW38	1151 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	KIAA1143	Q96AT1	154 aa	Predicted RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	UBL7	Q96S82	380 aa	Predicted RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	NRTN	Q99748	197 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	TRIM56	Q9BRZ2	755 aa	Known RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	ZPBP	Q9BS86	351 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	KIFC1	Q9BW19	673 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	B3GNT4	Q9C0J1	378 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	KLHL25	Q9H0H3	589 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	XAB2	Q9HCS7	855 aa	Known RBP	14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	PDE7B	Q9NP56	450 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	IL1RAPL1	Q9NZN1	696 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	PLAGL1	Q9UM63	463 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880	SAR1B	Q9Y6B6	198 aa		14.4	□□□□□ -0.1
SSR4-208	ENST00000471880		K7ENP7	123 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	BTN3A1	O00481	513 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	EFS	O43281	561 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	KIAA0754	O94854	1291 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	NELFE	P18615	380 aa	Known RBP	14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	CCR7	P32248	378 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	KPNA2	P52292	529 aa	Known RBP	14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	PLOD1	Q02809	727 aa	Predicted RBP	14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	TMTC4	Q5T4D3	741 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	INO80C	Q6PI98	192 aa	Predicted RBP	14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	CAND1	Q86VP6	1230 aa	Known RBP	14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	PPP1R3B	Q86XI6	285 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	PPIL6	Q8IXY8	311 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	UNC5B	Q8IZJ1	945 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	ASZ1	Q8WWH4	475 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	KLHL6	Q8WZ60	621 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	NKD1	Q969G9	470 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	STAMBPL1	Q96FJ0	436 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	PPM1M	Q96MI6	270 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	SERPINB12	Q96P63	405 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	PANX3	Q96QZ0	392 aa		14.39	□□□□□ -0.11
SSR4-208	ENST00000471880	CD180	Q99467	661 aa		14.39	□□□□□ -0.11

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