RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 LINGO2Q7L985 606 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KCNK18Q7Z418 384 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TMEM145Q8NBT3 493 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TRPV1Q8NER1 839 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 EPS8L1Q8TE68 723 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 P2RY11Q96G91 374 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 BTN2A3PQ96KV6 586 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF471Q9BX82 626 aaPredicted RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 EHD1Q9H4M9 534 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ANKZF1Q9H8Y5 726 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MRPS30Q9NP92 439 aaKnown RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TRPV5Q9NQA5 729 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 J3QRK9 145 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 hCG_2039718K7EN88 272 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CLDN9O95484 217 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PTNP21246 168 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLC5A3P53794 718 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 BST1Q10588 318 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CAPSQ13938 189 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PDK3Q15120 406 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 APOBEC3HQ6NTF7 200 aaKnown RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR2T12Q8NG77 320 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MCFD2Q8NI22 146 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GPR21Q99679 349 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DOCK9Q9BZ29 2069 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FAM227AF5H4B4 570 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RFX5P48382 616 aaPredicted RBP13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PDLIM2Q96JY6 352 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ERVW-1Q9UQF0 538 aa13.06□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 A2ML1A8K2U0 1454 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 E9PAM4 449 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TBX1O43435 398 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LIASO43766 372 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NME6O75414 186 aaPredicted RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PRNPP04156 253 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PSMA1P25786 263 aaKnown RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GDI1P31150 447 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FOXK1P85037 733 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CAMK2DQ13557 499 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ADNP2Q6IQ32 1131 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GRHL2Q6ISB3 625 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PLET1Q6UQ28 207 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 AHSA2Q719I0 299 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GPALPP1Q8IXQ4 340 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SYNPOQ8N3V7 929 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF350Q9GZX5 532 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MMADHCQ9H3L0 296 aaPredicted RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLCO1B3Q9NPD5 702 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ATG2BQ96BY7 2078 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF878C9JN71 531 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 B3GALT2O43825 422 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ASLP04424 464 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 AGXTP21549 392 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 KLHL26Q53HC5 615 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GCNT6Q5T4J0 391 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 HNRNPLLQ8WVV9 542 aaKnown RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PHB2Q99623 299 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLC15A5A6NIM6 579 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NADKO95544 446 aaPredicted RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 LAG3P18627 525 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NPR2P20594 1047 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF234Q14588 700 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MED27Q6P2C8 311 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RBM44Q6ZP01 1051 aaKnown RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 WDR77Q9BQA1 342 aaPredicted RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TMEM134Q9H6X4 195 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZNF639Q9UID6 485 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 FADS2P1A8MWK0 482 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TNFRSF11BO00300 401 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CHRNB4P30926 498 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MARCKSL1P49006 195 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DSC2Q02487 901 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLC10A7Q0GE19 358 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 DACT2Q5SW24 774 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NOXRED1Q6NXP6 359 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TNFAIP8L2Q6P589 184 aaPredicted RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SPATC1Q76KD6 591 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CEP97Q8IW35 865 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 WDR55Q9H6Y2 383 aaPredicted RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MEAF6Q9HAF1 191 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TMEM165Q9HC07 324 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RAPGEFL1Q9UHV5 662 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MYO7AQ13402 2215 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 C9IYK1 514 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PDPK1O15530 556 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 MMP3P08254 477 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 IGFBP5P24593 272 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 GJA9P57773 515 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 SLCO6A1Q86UG4 719 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ZBTB2Q8N680 514 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 NCSTNQ92542 709 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RTKNQ9BST9 563 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 IFT27Q9BW83 186 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 OR14I1A6ND48 311 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PEX10O60683 326 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 ITGA5P08648 1049 aa13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 RPL10P27635 214 aaKnown RBP13.05□□□□□ -0.32
NPHP3-ACAD11-201ENST00000471702 PPIGQ13427 754 aaKnown RBP eCLIP13.05□□□□□ -0.325e-8■■■□□ 18.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms