RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TCEAL6Q6IPX3 200 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 SLC23A3Q6PIS1 610 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 MDM1Q8TC05 714 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 ASB11Q8WXH4 323 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 ATOH1Q92858 354 aaPredicted RBP18.76■□□□□ 0.59
PSPC1-203ENST00000471658 TCEAL3Q969E4 200 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 TSNARE1Q96NA8 513 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 FAM111AQ96PZ2 611 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 INSM2Q96T92 566 aaPredicted RBP18.76■□□□□ 0.59
PSPC1-203ENST00000471658 GSDMCQ9BYG8 508 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 MLXIPLQ9NP71 852 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 TAAR2Q9P1P5 351 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 CPSF2Q9P2I0 782 aaKnown RBP18.76■□□□□ 0.59
PSPC1-203ENST00000471658 GRID1Q9ULK0 1009 aa18.76■□□□□ 0.59
PSPC1-203ENST00000471658 EIF3FO00303 357 aaPredicted RBP18.75■□□□□ 0.59
PSPC1-203ENST00000471658 PRPF4O43172 522 aaKnown RBP eCLIP18.75■□□□□ 0.59
PSPC1-203ENST00000471658 PIAS2O75928 621 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 MATN4O95460 622 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 DPP6P42658 865 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 ATP6V0D1P61421 351 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 HNRNPKP61978 463 aaKnown RBP eCLIP18.75■□□□□ 0.59
PSPC1-203ENST00000471658 PLOD1Q02809 727 aaPredicted RBP18.75■□□□□ 0.59
PSPC1-203ENST00000471658 ACAP2Q15057 778 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 TSNAXIP1Q2TAA8 658 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 TECRLQ5HYJ1 363 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 DUS1LQ6P1R4 473 aaKnown RBP18.75■□□□□ 0.59
PSPC1-203ENST00000471658 LVRNQ6Q4G3 990 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 NEK10Q6ZWH5 1172 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 PDZD3Q86UT5 571 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 ZNF548Q8NEK5 533 aaPredicted RBP18.75■□□□□ 0.59
PSPC1-203ENST00000471658 KIAA1191Q96A73 305 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 PKNOX2Q96KN3 472 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 XPR1Q9UBH6 696 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 SPASTQ9UBP0 616 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 PI4KAP42356 2102 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 CACNA1HO95180 2353 aa18.75■□□□□ 0.59
PSPC1-203ENST00000471658 TP53BP1Q12888 1972 aaPredicted RBP18.75■□□□□ 0.59
PSPC1-203ENST00000471658 PRAMEF33A0A0G2JMD5 474 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 OR52A4PA6NMU1 304 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 TK2O00142 265 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 AQP9O43315 295 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 PLIN3O60664 434 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 PROCP04070 461 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 SLC35G4P0C7Q5 338 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 BDKRB1P46663 353 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 ZNF423Q2M1K9 1284 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 UAP1L1Q3KQV9 507 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 LAIR1Q6GTX8 287 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 SBSNQ6UWP8 590 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 RABEPKQ7Z6M1 372 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 ARMC2Q8NEN0 867 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 MGARPQ8TDB4 240 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 DENND1AQ8TEH3 1009 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 PATE1Q8WXA2 126 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 TFGQ92734 400 aaPredicted RBP18.74■□□□□ 0.59
PSPC1-203ENST00000471658 IQCGQ9H095 443 aaKnown RBP18.74■□□□□ 0.59
PSPC1-203ENST00000471658 TFB2MQ9H5Q4 396 aaKnown RBP18.74■□□□□ 0.59
PSPC1-203ENST00000471658 FAM53CQ9NYF3 392 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 UTP6Q9NYH9 597 aaKnown RBP18.74■□□□□ 0.59
PSPC1-203ENST00000471658 CIDEBQ9UHD4 219 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 PCDHGA5Q9Y5G8 931 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 TMEM131Q92545 1883 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 GPR179Q6PRD1 2367 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 A6NCN8 305 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 GFYI3L273 518 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 YY2O15391 372 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 RXRGP48443 463 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 PPP2R2AP63151 447 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 ELOCQ15369 112 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 PHKG1Q16816 387 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 CCSMST1Q4G0I0 132 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 PLA2G2CQ5R387 149 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 KLC3Q6P597 504 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 ABRAXAS1Q6UWZ7 409 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 UBE2R2Q712K3 238 aaPredicted RBP18.74■□□□□ 0.59
PSPC1-203ENST00000471658 RASGRP3Q8IV61 690 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 FAM46DQ8NEK8 389 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 EXT2Q93063 718 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 C12orf66Q96MD2 445 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 ATOH8Q96SQ7 321 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 GAREM1Q9H706 876 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 GMEB2Q9UKD1 530 aa18.74■□□□□ 0.59
PSPC1-203ENST00000471658 ADAMTS9Q9P2N4 1935 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 CACNA1EQ15878 2313 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 ARHGEF33A8MVX0 844 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 TARM1B6A8C7 271 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 ARHGAP33O14559 1287 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 PSIP1O75475 530 aaKnown RBP18.73■□□□□ 0.59
PSPC1-203ENST00000471658 NR1D1P20393 614 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 OAS2P29728 719 aaKnown RBP18.73■□□□□ 0.59
PSPC1-203ENST00000471658 RPE65Q16518 533 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 DEFB133Q30KQ1 61 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 LCA5Q86VQ0 697 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 SLC25A45Q8N413 288 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 OR5AR1Q8NGP9 310 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 MRPL46Q9H2W6 279 aaKnown RBP18.73■□□□□ 0.59
PSPC1-203ENST00000471658 IMP3Q9NV31 184 aaKnown RBP18.73■□□□□ 0.59
PSPC1-203ENST00000471658 PCOLCE2Q9UKZ9 415 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 RNF112Q9ULX5 631 aa18.73■□□□□ 0.59
PSPC1-203ENST00000471658 PDE10AQ9Y233 779 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms