RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 CROTQ9UKG9 612 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 POLHQ9Y253 713 aa8.89□□□□□ -0.99
SF3A1-206ENST00000471037 USP9XQ93008 2570 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SDR42E2A6NKP2 422 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 ANKRD66B4E2M5 251 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 K7EM74 188 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 DYNC1I1O14576 645 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 VIPP01282 170 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 FURINP09958 794 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 FAM153BP0C7A2 387 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 FGF5P12034 268 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 ZNF8P17098 575 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 NR1D1P20393 614 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SLC19A1P41440 591 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 GRIA1P42261 906 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 CAPZBP47756 277 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 PMS2P54278 862 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SESN2P58004 480 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 DCDC1P59894 354 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SH3BP2P78314 561 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 DHX9Q08211 1270 aaKnown RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 PDIA2Q13087 525 aaKnown RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 LAMB3Q13751 1172 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 QPCTQ16769 361 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 BBS9Q3SYG4 887 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 FAM153CQ494X1 144 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 CCDC38Q502W7 563 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SIRPB2Q5JXA9 342 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 FNBP1LQ5T0N5 605 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 DENND5AQ6IQ26 1287 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 CYB5D1Q6P9G0 228 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 ASB18Q6ZVZ8 466 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 TRMT10CQ7L0Y3 403 aaKnown RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 TMC3Q7Z5M5 1100 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 APLFQ8IW19 511 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 RBM12BQ8IXT5 1001 aaKnown RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 TEX19Q8NA77 164 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 GALNT6Q8NCL4 622 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 EID2BQ96D98 161 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 STAMBPL1Q96FJ0 436 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 PWWP2AQ96N64 755 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 TTC25Q96NG3 672 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 OR6C1Q96RD1 312 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SRPK1Q96SB4 655 aaKnown RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 TIMM29Q9BSF4 260 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 NAT9Q9BTE0 207 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 ZSCAN5AQ9BUG6 496 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 RAB33BQ9H082 229 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 OR2AG1Q9H205 316 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 TRIM39Q9HCM9 518 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 ARFGAP3Q9NP61 516 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SAYSD1Q9NPB0 183 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SCHIP1Q9P0W5 487 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 ZNF624Q9P2J8 865 aaPredicted RBP8.88□□□□□ -0.99
SF3A1-206ENST00000471037 EPHA6Q9UF33 1036 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 SLC30A1Q9Y6M5 507 aa8.88□□□□□ -0.99
SF3A1-206ENST00000471037 ZNF106Q9H2Y7 1883 aaKnown RBP8.87□□□□□ -0.99
SF3A1-206ENST00000471037 MAGEB16A2A368 324 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 BLACEA4D250 179 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 C21orf140B9A014 251 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 AVILO75366 819 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 SPAG6O75602 509 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 CREG1O75629 220 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 KIAA0754O94854 1291 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 SLC25A14O95258 325 aaPredicted RBP8.87□□□□□ -0.99
SF3A1-206ENST00000471037 MT-ND3P03897 115 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 TYRP1P17643 537 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 MGAT1P26572 445 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 MAGEA4P43358 317 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 CHRNA4P43681 627 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 LEPRP48357 1165 aaKnown RBP8.87□□□□□ -0.99
SF3A1-206ENST00000471037 SEPHS1P49903 392 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 MLLT10P55197 1068 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 OLIG2Q13516 323 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 DNASE1L3Q13609 305 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 ERV3-1Q14264 604 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 GALNT3Q14435 633 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 INSCQ1MX18 579 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 MSS51Q4VC12 460 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 AGAP9Q5VTM2 703 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 FBXO38Q6PIJ6 1188 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 ABRAXAS1Q6UWZ7 409 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 WASH2PQ6VEQ5 465 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 ADGRG6Q86SQ4 1221 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 LRRTM4Q86VH4 590 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 RASGRP3Q8IV61 690 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 TRIM48Q8IWZ4 208 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 ZBED8Q8IZ13 594 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 MREGQ8N565 214 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 SLC25A41Q8N5S1 370 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 TRAM1L1Q8N609 369 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 GPR26Q8NDV2 337 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 PPHLN1Q8NEY8 458 aaKnown RBP8.87□□□□□ -0.99
SF3A1-206ENST00000471037 PYROXD1Q8WU10 500 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 KLHL6Q8WZ60 621 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 RSC1A1Q92681 617 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 GLYATL1Q969I3 302 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 SIGLEC10Q96LC7 697 aa8.87□□□□□ -0.99
SF3A1-206ENST00000471037 TGM7Q96PF1 710 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms