RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 TO15178 435 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 PAPSS1O43252 624 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-202ENST00000470094 SSX4O60224 188 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 CGAP01215 116 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 ALDH4A1P30038 563 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 CDH11P55287 796 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 PMP22Q01453 160 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 CALD1Q05682 793 aaKnown RBP3.61□□□□□ -1.83
BRCA2-202ENST00000470094 MFSD6Q6ZSS7 791 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 SH2D5Q6ZV89 423 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 HAUS6Q7Z4H7 955 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 ISCA2Q86U28 154 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 AACSQ86V21 672 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 TAGAPQ8N103 731 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 POC5Q8NA72 575 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 WDR20Q8TBZ3 569 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 TAS1R2Q8TE23 839 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 ERLEC1Q96DZ1 483 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 SLC47A1Q96FL8 570 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 SENP5Q96HI0 755 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-202ENST00000470094 ABHD6Q9BV23 337 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 KIFC3Q9BVG8 833 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 MOV10L1Q9BXT6 1211 aaKnown RBP3.61□□□□□ -1.83
BRCA2-202ENST00000470094 KCNK15Q9H427 330 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 INTS10Q9NVR2 710 aaKnown RBP3.61□□□□□ -1.83
BRCA2-202ENST00000470094 CHORDC1Q9UHD1 332 aaPredicted RBP3.61□□□□□ -1.83
BRCA2-202ENST00000470094 SLC7A7Q9UM01 511 aa3.61□□□□□ -1.83
BRCA2-202ENST00000470094 MAGEB17A8MXT2 336 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 DKC1O60832 514 aaKnown RBP eCLIP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 AVILO75366 819 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 ERAL1O75616 437 aaKnown RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 BEST1O76090 585 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 PLA2G4BP0C869 781 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 RNF224P0DH78 156 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 NR2F1P10589 423 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 ACP2P11117 423 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 SAT1P21673 171 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 NNMTP40261 264 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 EIF2DP41214 584 aaKnown RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 NRIP1P48552 1158 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 ERVK11-1P61568 191 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 SIRPAP78324 504 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 KCNJ10P78508 379 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 IFI35P80217 286 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 STK4Q13043 487 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 KIAA1644Q3SXP7 199 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 SPECC1Q5M775 1068 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 DHRS7BQ6IAN0 325 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 FAM53AQ6NSI3 398 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 LDB1Q86U70 411 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 PRPF39Q86UA1 669 aaKnown RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 NKAIN3Q8N8D7 197 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 CCDC191Q8NCU4 936 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 PPFIBP2Q8ND30 876 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 MCUQ8NE86 351 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 TRIM58Q8NG06 486 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 TMEM190Q8WZ59 177 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 TMEM143Q96AN5 459 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 LRR1Q96L50 414 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 OR6C1Q96RD1 312 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 MYADMQ96S97 322 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 PAFAH2Q99487 392 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 TRAF4Q9BUZ4 470 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 TEX12Q9BXU0 123 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 PPIL3Q9H2H8 161 aaKnown RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 PELI2Q9HAT8 420 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 SIX2Q9NPC8 291 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 KCNJ14Q9UNX9 436 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 KCNK7Q9Y2U2 307 aa3.6□□□□□ -1.83
BRCA2-202ENST00000470094 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 ASTN2O75129 1339 aaPredicted RBP3.6□□□□□ -1.83
BRCA2-202ENST00000470094 LOC100509620A0A075B734 347 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 A0A1W2PRB8 838 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 PRR32B1ATL7 298 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 PSMD14O00487 310 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 SLC22A2O15244 555 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 PRAMEF11O60813 436 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 ZWINTO95229 277 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 CD48P09326 243 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 GJA1P17302 382 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 ITGA3P26006 1051 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 MAP2K2P36507 400 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 HILS1P60008 231 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 GNB1P62873 340 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 ARMC3Q5W041 872 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 KRT79Q5XKE5 535 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 ZNF790Q6PG37 636 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 CORO6Q6QEF8 472 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 ZNF554Q86TJ5 538 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 KBTBD6Q86V97 674 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 DNAJC22Q8N4W6 341 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 CPSF7Q8N684 471 aaKnown RBP3.59□□□□□ -1.83
BRCA2-202ENST00000470094 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
BRCA2-202ENST00000470094 PAPD5Q8NDF8 572 aaKnown RBP3.59□□□□□ -1.83
BRCA2-202ENST00000470094 JAKMIP2Q96AA8 810 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 NSL1Q96IY1 281 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 SGK494Q96LW2 274 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 NEK1Q96PY6 1258 aa3.59□□□□□ -1.83
BRCA2-202ENST00000470094 BAG1Q99933 345 aaPredicted RBP3.59□□□□□ -1.83
BRCA2-202ENST00000470094 RTP3Q9BQQ7 232 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms