RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ARHGEF18Q6ZSZ5 1173 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 SYVN1Q86TM6 617 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 CARFQ8N187 725 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 LRRC57Q8N9N7 239 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 ACRBPQ8NEB7 543 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 OR52E1Q8NGJ3 308 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 OR1L3Q8NH93 324 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 TFGQ92734 400 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 LRRC45Q96CN5 670 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 CLIP3Q96DZ5 547 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 CDKN2AIPNLQ96HQ2 116 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 PPP1R2P1Q96PQ5 205 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 C19orf43Q9BQ61 176 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 TFB2MQ9H5Q4 396 aaKnown RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 NLE1Q9NVX2 485 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 POMT2Q9UKY4 750 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 PACSIN2Q9UNF0 486 aaPredicted RBP12.9□□□□□ -0.34
CPSF4-210ENST00000469897 BTRCQ9Y297 605 aa12.9□□□□□ -0.34
CPSF4-210ENST00000469897 IGLV3-16A0A075B6K0 115 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 TRBV5-4A0A0C4DH59 114 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 CCDC78A2IDD5 438 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 BTN3A1O00481 513 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 PVRP15151 417 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 ST6GAL1P15907 406 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 ACRV1P26436 265 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 CD151P48509 253 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 LMAN1P49257 510 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 GSDMDP57764 484 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 ABRQ12979 859 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 POU6F1Q14863 301 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 BRD3Q15059 726 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 ZNF658BQ4V348 819 aaPredicted RBP12.89□□□□□ -0.35
CPSF4-210ENST00000469897 IZUMO3Q5VZ72 239 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 CPZQ66K79 652 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 ZNF449Q6P9G9 518 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 PEX26Q7Z412 305 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 AMIGO1Q86WK6 493 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 KLHDC8BQ8IXV7 354 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 PIANPQ8IYJ0 282 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 SEC14L1Q92503 715 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 CPT1BQ92523 772 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 MIB2Q96AX9 1013 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 TRAPPC9Q96Q05 1148 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 ING2Q9H160 280 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 LATS2Q9NRM7 1088 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 SMARCAL1Q9NZC9 954 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 ANKMY1Q9P2S6 941 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 SERTAD3Q9UJW9 196 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 AMFRQ9UKV5 643 aa12.89□□□□□ -0.35
CPSF4-210ENST00000469897 GOLGA6L9A6NEM1 432 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 TMEM150CB9EJG8 249 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 H7C0S8 307 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 MATN2O00339 956 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 MAP3K7O43318 606 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 RORAP35398 523 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 VAV2P52735 878 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 GDF10P55107 478 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 CACNG1Q06432 222 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 DBN1Q16643 649 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 NAPRTQ6XQN6 538 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 ADGRF3Q8IZF5 1079 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 DSELQ8IZU8 1212 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 ENDOVQ8N8Q3 282 aaKnown RBP12.88□□□□□ -0.35
CPSF4-210ENST00000469897 TTC13Q8NBP0 860 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 STYXQ8WUJ0 223 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 LRFN5Q96NI6 719 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 ALS2CR12Q96Q35 445 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 TMEM121Q9BTD3 319 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 SLC25A23Q9BV35 468 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 SLC7A5P2Q9GIP4 190 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 RBSNQ9H1K0 784 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 MVB12BQ9H7P6 319 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 LRRC40Q9H9A6 602 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 ACTR5Q9H9F9 607 aaPredicted RBP12.88□□□□□ -0.35
CPSF4-210ENST00000469897 FANCEQ9HB96 536 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 ACSS2Q9NR19 701 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 PCMTD2Q9NV79 361 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 SNX7Q9UNH6 387 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 R3HDM2Q9Y2K5 976 aaKnown RBP12.88□□□□□ -0.35
CPSF4-210ENST00000469897 PRSS21Q9Y6M0 314 aa12.88□□□□□ -0.35
CPSF4-210ENST00000469897 ZFC3H1O60293 1989 aaKnown RBP12.88□□□□□ -0.35
CPSF4-210ENST00000469897 UBR5O95071 2799 aaPredicted RBP12.87□□□□□ -0.35
CPSF4-210ENST00000469897 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 TCRBV7S2A1N4TA0A589 114 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 OR51F1A6NGY5 319 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 TTLL8A6PVC2 850 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 C2orf74A8MZ97 194 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 PSMD3O43242 534 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 FTCDO95954 541 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 CAPN1P07384 714 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 RAB40ALP0C0E4 278 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 CYP2A7P20853 494 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 PTGIRP43119 386 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 RPA4Q13156 261 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 BOP1Q14137 746 aaKnown RBP12.87□□□□□ -0.35
CPSF4-210ENST00000469897 PTCHD3Q3KNS1 767 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 ZNF789Q5FWF6 425 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 CDHR3Q6ZTQ4 885 aa12.87□□□□□ -0.35
CPSF4-210ENST00000469897 KIAA1328Q86T90 577 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms