RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SELENONQ9NZV5 590 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 DOLKQ9UPQ8 538 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TSC22D4Q9Y3Q8 395 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 OR51B4Q9Y5P0 310 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CCDC154A6NI56 674 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 PFDN6O15212 129 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 GREM1O60565 184 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 RSL1D1O76021 490 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TRBC1P01850 177 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ZNF7P17097 686 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CD53P19397 219 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ITGALP20701 1170 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ITPKAP23677 461 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 NFKBIAP25963 317 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 PBLDP30039 288 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TMED10P49755 219 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 WDR5P61964 334 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 GTF2H2Q13888 395 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 RAB33AQ14088 237 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 C16orf72Q14CZ0 275 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CYP51A1Q16850 503 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 LRRC26Q2I0M4 334 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 AP5B1Q2VPB7 878 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 C5orf22Q49AR2 442 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ATP6AP1LQ52LC2 224 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 OGFRL1Q5TC84 451 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ALG1LQ6GMV1 187 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 GTF2H2CQ6P1K8 395 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 BORAQ6PGQ7 559 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 PHYKPLQ8IUZ5 450 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 PGBD3Q8N328 593 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 MARVELD2Q8N4S9 558 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 KRTCAP2Q8N6L1 136 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TCF25Q9BQ70 676 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CAAP1Q9H8G2 361 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CERS4Q9HA82 394 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 PAK6Q9NQU5 681 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CNOT6Q9ULM6 557 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 RNF103-CHMP3A0A140T963 221 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 GAPDHSO14556 408 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 SLC22A3O75751 556 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TNFAIP8O95379 198 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CXCL10P02778 98 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 RPS17P08708 135 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 HSPA1AP0DMV8 641 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 HSPA1BP0DMV9 641 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CDH2P19022 906 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 LHCGRP22888 699 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 SLC6A2P23975 617 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 PTGER3P43115 390 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 SUOXP51687 545 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CDH15P55291 814 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 SELPLGQ14242 412 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 HERC3Q15034 1050 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TEAD2Q15562 447 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 OTUD3Q5T2D3 398 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TPGS2Q68CL5 300 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 CNKSR3Q6P9H4 555 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 SBSNQ6UWP8 590 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ERI1Q8IV48 349 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 KREMEN2Q8NCW0 462 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 FATE1Q969F0 183 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.26□□□□□ -0.935e-7■■■■■ 39
TOP3A-203ENST00000469739 TRIM43Q96BQ3 446 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ULK4Q96C45 1275 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 AURKBQ96GD4 344 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 Q9H521 79 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 FAM32AQ9Y421 112 aaKnown RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 HEMK1Q9Y5R4 338 aaPredicted RBP9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ANAPC1Q9H1A4 1944 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 WDR87Q6ZQQ6 2873 aa9.26□□□□□ -0.93
TOP3A-203ENST00000469739 ASPDHA6ND91 283 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 LOC730098B7Z3J9 87 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 FXYD1O00168 92 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 ESR1P03372 595 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 STT3AP46977 705 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 RXRGP48443 463 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 RFTN1Q14699 578 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-203ENST00000469739 SAMD4BQ5PRF9 694 aaKnown RBP9.25□□□□□ -0.93
TOP3A-203ENST00000469739 HMBOX1Q6NT76 420 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 CRTC1Q6UUV9 634 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 ZBTB49Q6ZSB9 765 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 VRK3Q8IV63 474 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 KCNJ9Q92806 393 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 ZFYVE19Q96K21 471 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 COX4I2Q96KJ9 171 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 TRPV5Q9NQA5 729 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 ARL15Q9NXU5 204 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 C6orf203Q9P0P8 240 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-203ENST00000469739 BRWD1Q9NSI6 2320 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 PLK4O00444 970 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 SOCS2O14508 198 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 OR7A17O14581 309 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 DENRO43583 198 aaKnown RBP9.25□□□□□ -0.93
TOP3A-203ENST00000469739 ZNF821O75541 412 aaPredicted RBP9.25□□□□□ -0.93
TOP3A-203ENST00000469739 GNAO1P09471 354 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 SRCP12931 536 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 SLC26A3P40879 764 aa9.25□□□□□ -0.93
TOP3A-203ENST00000469739 POLR2JP52435 117 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms