RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 ARHGEF18Q6ZSZ5 1173 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 CARFQ8N187 725 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 HEXDCQ8WVB3 486 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 LCN9Q8WX39 176 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 MR1Q95460 341 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 PPP1R2P1Q96PQ5 205 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 SRMSQ9H3Y6 488 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 HEBP2Q9Y5Z4 205 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 FER1L5A0AVI2 2057 aa23.79■■□□□ 1.4
PTCH1-210ENST00000468211 NAV2Q8IVL1 2488 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 H7C0S8 307 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 BTN3A1O00481 513 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 CDH3P22223 829 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 KLRB1Q12918 225 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 KLF1Q13351 362 aaPredicted RBP23.78■■□□□ 1.4
PTCH1-210ENST00000468211 POU6F1Q14863 301 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 TMTC4Q5T4D3 741 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 CPZQ66K79 652 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 TAS2R42Q7RTR8 314 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 APLFQ8IW19 511 aaPredicted RBP23.78■■□□□ 1.4
PTCH1-210ENST00000468211 CDKN2AIPNLQ96HQ2 116 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 GPR87Q9BY21 358 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 CHST8Q9H2A9 424 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 C1GALT1Q9NS00 363 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 AMFRQ9UKV5 643 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 PLAAQ9Y263 795 aa23.78■■□□□ 1.4
PTCH1-210ENST00000468211 FARSAQ9Y285 508 aaKnown RBP23.78■■□□□ 1.4
PTCH1-210ENST00000468211 CCDC88CQ9P219 2028 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 CCDC78A2IDD5 438 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 GSAPA4D1B5 854 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 FTCDO95954 541 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 ST6GAL1P15907 406 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 PRDX3P30048 256 aaKnown RBP23.77■■□□□ 1.4
PTCH1-210ENST00000468211 CHAF1BQ13112 559 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 PRKAA1Q13131 559 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 SEMA5AQ13591 1074 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 DBN1Q16643 649 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 UGT8Q16880 541 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 ZNF789Q5FWF6 425 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 PLEKHS1Q5SXH7 462 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 FAM69BQ5VUD6 431 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 ASB18Q6ZVZ8 466 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 PEX26Q7Z412 305 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 TMEM139Q8IV31 216 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 OR52E1Q8NGJ3 308 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 OR8K5Q8NH50 307 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 OR1L3Q8NH93 324 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 SLC35B2Q8TB61 432 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 COL26A1Q96A83 441 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 TMEM121Q9BTD3 319 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 KLHL25Q9H0H3 589 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 XKR8Q9H6D3 395 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 LATS2Q9NRM7 1088 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 PRSS21Q9Y6M0 314 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 LRRK2Q5S007 2527 aa23.77■■□□□ 1.4
PTCH1-210ENST00000468211 PVRP15151 417 aa23.76■■□□□ 1.39
PTCH1-210ENST00000468211 RPS15P62841 145 aaKnown RBP23.76■■□□□ 1.39
PTCH1-210ENST00000468211 PRKG2Q13237 762 aa23.76■■□□□ 1.39
PTCH1-210ENST00000468211 KIAA1328Q86T90 577 aa23.76■■□□□ 1.39
PTCH1-210ENST00000468211 SYVN1Q86TM6 617 aa23.76■■□□□ 1.39
PTCH1-210ENST00000468211 HGH1Q9BTY7 390 aa23.76■■□□□ 1.39
PTCH1-210ENST00000468211 PITPNM3Q9BZ71 974 aa23.76■■□□□ 1.39
PTCH1-210ENST00000468211 TFB2MQ9H5Q4 396 aaKnown RBP23.76■■□□□ 1.39
PTCH1-210ENST00000468211 LRRC40Q9H9A6 602 aa23.76■■□□□ 1.39
PTCH1-210ENST00000468211 PCSK5Q92824 1860 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 OR51F1A6NGY5 319 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 CD151P48509 253 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 LMAN1P49257 510 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 CACNG1Q06432 222 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 BOP1Q14137 746 aaKnown RBP23.75■■□□□ 1.39
PTCH1-210ENST00000468211 ADGRF3Q8IZF5 1079 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 DSELQ8IZU8 1212 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 TTC13Q8NBP0 860 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 DESI2Q9BSY9 194 aa23.75■■□□□ 1.39
PTCH1-210ENST00000468211 GOLGA6L9A6NEM1 432 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 TMEM150CB9EJG8 249 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 MEN1O00255 615 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 MATN2O00339 956 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 IFRD1O00458 451 aaPredicted RBP23.74■■□□□ 1.39
PTCH1-210ENST00000468211 AP2A1O95782 977 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 PTMAP06454 111 aaKnown RBP23.74■■□□□ 1.39
PTCH1-210ENST00000468211 PSMA3P25788 255 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 RORAP35398 523 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 MLLT10P55197 1068 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 IZUMO3Q5VZ72 239 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 UBL4BQ8N7F7 174 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 TEX19Q8NA77 164 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 STYXQ8WUJ0 223 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 TFGQ92734 400 aaPredicted RBP23.74■■□□□ 1.39
PTCH1-210ENST00000468211 LRRC45Q96CN5 670 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 LRFN5Q96NI6 719 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 TRAPPC9Q96Q05 1148 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 BAG1Q99933 345 aaPredicted RBP23.74■■□□□ 1.39
PTCH1-210ENST00000468211 MVB12BQ9H7P6 319 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 SMARCAL1Q9NZC9 954 aa23.74■■□□□ 1.39
PTCH1-210ENST00000468211 MROH6A6NGR9 719 aa23.73■■□□□ 1.39
PTCH1-210ENST00000468211 ARGFXA6NJG6 315 aa23.73■■□□□ 1.39
PTCH1-210ENST00000468211 ZNF189O75820 626 aaPredicted RBP23.73■■□□□ 1.39
PTCH1-210ENST00000468211 CAPN1P07384 714 aa23.73■■□□□ 1.39
PTCH1-210ENST00000468211 SRSF1Q07955 248 aaKnown RBP eCLIP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms