RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 HAUS5O94927 633 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 SLC4A1P02730 911 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 APOA4P06727 396 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 RALBP11234 206 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 ITPKBP27987 946 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 GABRB3P28472 473 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 CRHR1P34998 444 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 NSG1P42857 185 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 RAB10P61026 200 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 CCL7P80098 99 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 ILF3Q12906 894 aaKnown RBP eCLIP11.84□□□□□ -0.51
CTNS-205ENST00000467663 USP10Q14694 798 aaKnown RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 ZKSCAN8Q15776 578 aaPredicted RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 SEPT7Q16181 437 aaKnown RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 DBN1Q16643 649 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 TSNAXIP1Q2TAA8 658 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 LDLRAP1Q5SW96 308 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 HENMT1Q5T8I9 393 aaKnown RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 SH2D5Q6ZV89 423 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 C17orf82Q86X59 251 aaPredicted RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 SFTPA2Q8IWL1 248 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 NXPE1Q8N323 547 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 BANPQ8N9N5 519 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 PRR11Q96HE9 360 aaPredicted RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 COX14Q96I36 57 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 GFM1Q96RP9 751 aaKnown RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 GSDMCQ9BYG8 508 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 DPEP2Q9H4A9 486 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 UGT1A7Q9HAW7 530 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 UGT1A10Q9HAW8 530 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 UGT1A8Q9HAW9 530 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 SYTL2Q9HCH5 934 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 BPIFA1Q9NP55 256 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 ASCL3Q9NQ33 180 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 SPATS2LQ9NUQ6 558 aaKnown RBP11.84□□□□□ -0.51
CTNS-205ENST00000467663 TAS2R13Q9NYV9 303 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 IL1RAPL1Q9NZN1 696 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 KLHL42Q9P2K6 505 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 CD84Q9UIB8 345 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 CRLS1Q9UJA2 301 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 SATB2Q9UPW6 733 aa11.84□□□□□ -0.51
CTNS-205ENST00000467663 A0A1W2PPM1 405 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 TMEM120BA0PK00 339 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 B4DGG1 531 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 D6RAR5 112 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 PIAS1O75925 651 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 ALDOAP04075 364 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 RPLP0P05388 317 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 PYGBP11216 843 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 PKMP14618 531 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 ACRV1P26436 265 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 HPDP32754 393 aaPredicted RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 MLLT3P42568 568 aaPredicted RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 GNPDA1P46926 289 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 CSRP3P50461 194 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 PCBP4P57723 403 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 MPP1Q00013 466 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 CTBSQ01459 385 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 PTPRCAPQ14761 206 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 CCDC153Q494R4 210 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 C3orf38Q5JPI3 329 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 FAM151BQ6UXP7 276 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 TAS2R42Q7RTR8 314 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 GPR26Q8NDV2 337 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 ZNF248Q8NDW4 579 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 WDR36Q8NI36 951 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 LPGAT1Q92604 370 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 KCNJ9Q92806 393 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 LIN37Q96GY3 246 aaPredicted RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 CRELD1Q96HD1 420 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 SLC46A1Q96NT5 459 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 PANX3Q96QZ0 392 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 COPS8Q99627 209 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 SELENOSQ9BQE4 189 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 AARSD1Q9BTE6 412 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 RIOK2Q9BVS4 552 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 TSSK1BQ9BXA7 367 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 ZCCHC2Q9C0B9 1178 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 LRRN3Q9H3W5 708 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 KCNK9Q9NPC2 374 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 FBXO6Q9NRD1 293 aaPredicted RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 SNX15Q9NRS6 342 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 THSD1Q9NS62 852 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 ZDHHC3Q9NYG2 299 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 TAAR2Q9P1P5 351 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 MARCH4Q9P2E8 410 aaPredicted RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 LRIT1Q9P2V4 623 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 GNPTGQ9UJJ9 305 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 MTO1Q9Y2Z2 717 aaKnown RBP11.83□□□□□ -0.52
CTNS-205ENST00000467663 ACOT9Q9Y305 439 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 ST14Q9Y5Y6 855 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 RNF215Q9Y6U7 377 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 RP1P56715 2156 aa11.83□□□□□ -0.52
CTNS-205ENST00000467663 IGLV3-16A0A075B6K0 115 aa11.82□□□□□ -0.52
CTNS-205ENST00000467663 CCDC187A0A096LP49 1063 aa11.82□□□□□ -0.52
CTNS-205ENST00000467663 A0A096LPK6 155 aa11.82□□□□□ -0.52
CTNS-205ENST00000467663 OR51F1A6NGY5 319 aa11.82□□□□□ -0.52
CTNS-205ENST00000467663 CDRT15L2A8MXV6 281 aa11.82□□□□□ -0.52
CTNS-205ENST00000467663 TMX2-CTNND1H3BSU7 103 aa11.82□□□□□ -0.52
CTNS-205ENST00000467663 GAPDHSO14556 408 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms