RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 KLHL33A6NCF5 533 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 GOLGA8MH3BSY2 632 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 DLGAP3O95886 979 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 RECKO95980 971 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 PPARGP37231 505 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 FNTAP49354 379 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 POLE2P56282 527 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 ACVR1Q04771 509 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 GPR18Q14330 331 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 KRT33BQ14525 404 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 ITIH4Q14624 930 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 CASC4Q6P4E1 433 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 ZNF449Q6P9G9 518 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 ZNF534Q76KX8 674 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 LDB1Q86U70 411 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 C17orf53Q8N3J3 647 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 SPDYE1Q8NFV5 336 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 HM13Q8TCT9 377 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 CPT1BQ92523 772 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 ZNF768Q9H5H4 540 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 VPS37BQ9H9H4 285 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 SIDT1Q9NXL6 827 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 NEU2Q9Y3R4 380 aa13.72□□□□□ -0.21
CCHCR1-211ENST00000467553 CD3EAPO15446 510 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 OR1I1O60431 355 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 AP2A2O94973 939 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 MT-ND3P03897 115 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 SLC35G4P0C7Q5 338 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 OR56A5P0C7T3 313 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 STAT5AP42229 794 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 PAFAH1B1P43034 410 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 SEMA3AQ14563 771 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 BRD3Q15059 726 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 PLCL1Q15111 1095 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 DUS1LQ6P1R4 473 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 KLHL35Q6PF15 583 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 CERS6Q6ZMG9 384 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 PRSS42Q7Z5A4 293 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 CAND1Q86VP6 1230 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 BPHLQ86WA6 291 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 CREG2Q8IUH2 290 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 KLHL7Q8IXQ5 586 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 OTUD6BQ8N6M0 293 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 GPR150Q8NGU9 434 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 APOBEC4Q8WW27 367 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 PEX13Q92968 403 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 MFSD3Q96ES6 412 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 FCRL4Q96PJ5 515 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 FERD3LQ96RJ6 166 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 KIFC1Q9BW19 673 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 COG4Q9H9E3 785 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 CATSPERZQ9NTU4 200 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 ANAPC2Q9UJX6 822 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 PCDHB3Q9Y5E6 796 aa13.71□□□□□ -0.21
CCHCR1-211ENST00000467553 LOC101059948A0A1B0GTJ6 334 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 QSOX1O00391 747 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 TMEM63AO94886 807 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 VAPBO95292 243 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 FTH1P02794 183 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 MTHFD1P11586 935 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 TCN2P20062 427 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 PDHA2P29803 388 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 MAGEA6P43360 314 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 CAPZBP47756 277 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 CDC20Q12834 499 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 CAPRIN2Q6IMN6 1127 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 NAPRTQ6XQN6 538 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 TIPARPQ7Z3E1 657 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 MPP5Q8N3R9 675 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 PHC3Q8NDX5 983 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 MCUQ8NE86 351 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 KLHL6Q8WZ60 621 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 ELMO1Q92556 727 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 RMDN2Q96LZ7 410 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 TGM7Q96PF1 710 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 CTRCQ99895 268 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 MRM3Q9HC36 420 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 TREX1Q9NSU2 369 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 OGFRQ9NZT2 677 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 SAMD15Q9P1V8 674 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 SEMA5BQ9P283 1151 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 MARCH4Q9P2E8 410 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 ASIC3Q9UHC3 531 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 KCND3Q9UK17 655 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 SOX13Q9UN79 622 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 COLEC10Q9Y6Z7 277 aa13.7□□□□□ -0.22
CCHCR1-211ENST00000467553 SDR42E2A6NKP2 422 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 GOLGA8KD6RF30 607 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 F8W8V4 182 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 GOLGA8TH3BQL2 631 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 IFRD1O00458 451 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 NDUFS3O75489 264 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 FGF5P12034 268 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 CASQ1P31415 396 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 PREPP48147 710 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 CSE1LP55060 971 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 GFERP55789 205 aa13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 AARS2Q5JTZ9 985 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-211ENST00000467553 IRGCQ6NXR0 463 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms