RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 VN1R1Q9GZP7 353 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 Q9N2K0 584 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 MIOSQ9NXC5 875 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 ZNF580Q9UK33 172 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 ACAD8Q9UKU7 415 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 LRP12Q9Y561 859 aa1.8□□□□□ -2.12
NUCKS1-202ENST00000464938 IGLV5-45A0A087WSX0 123 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 A0A087WV48 116 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 A0A0B4J293 547 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MED19A0JLT2 244 aaPredicted RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TSPAN1O60635 241 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 RNASEH1O60930 286 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TADA2AO75478 443 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 CELF2O95319 508 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TRUB2O95900 331 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 IGHV2-70P01814 119 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 LIPFP07098 398 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 H1F0P07305 194 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 RAB40ALP0C0E4 278 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 CCDC175P0C221 793 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 FGF5P12034 268 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MSH3P20585 1137 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ACHEP22303 614 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 DNASE1P24855 282 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MPZP25189 248 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MARK3P27448 753 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 EPHA2P29317 976 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TKTP29401 623 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 SLC6A6P31641 620 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MC5RP33032 325 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 IL15P40933 162 aaPredicted RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MTHFRP42898 656 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 SLC9A3P48764 834 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 AMPHP49418 695 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 HOXA1P49639 335 aaPredicted RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 RAB28P51157 221 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 THOP1P52888 689 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TERF1P54274 439 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ROR1Q01973 937 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 RBPJQ06330 500 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TFCP2Q12800 502 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 HSPB3Q12988 150 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MFAP5Q13361 173 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 PPIGQ13427 754 aaKnown RBP eCLIP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ZNF273Q14593 569 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 COG2Q14746 738 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 HYAL4Q2M3T9 481 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ZNF672Q499Z4 452 aaPredicted RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ACCSLQ4AC99 568 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MDH1BQ5I0G3 518 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 C1orf141Q5JVX7 400 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ARMC4Q5T2S8 1044 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 PLA2G4FQ68DD2 849 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 KCTD8Q6ZWB6 473 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ANO5Q75V66 913 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 SLFN11Q7Z7L1 901 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 GLRX5Q86SX6 157 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TMPRSS11BQ86T26 416 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 IQCHQ86VS3 1027 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 LONP2Q86WA8 852 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 PLD3Q8IV08 490 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 CRYBG2Q8N1P7 616 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 KBTBD3Q8NAB2 608 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 KLHDC9Q8NEP7 349 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 OR5M8Q8NGP6 311 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 RNF128Q8TEB7 428 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 SEMA4DQ92854 862 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 SLAMF9Q96A28 289 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 DHX58Q96C10 678 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 HDAC11Q96DB2 347 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 RMDN1Q96DB5 314 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 SPDL1Q96EA4 605 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 CNDP2Q96KP4 475 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 FER1L6-AS2Q96M78 137 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ZMAT2Q96NC0 199 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MUS81Q96NY9 551 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 FEVQ99581 238 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 NAA11Q9BSU3 229 aaPredicted RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TRMT61BQ9BVS5 477 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 NUP85Q9BW27 656 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 AP1M1Q9BXS5 423 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 EDEM3Q9BZQ6 932 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 OPA3Q9H6K4 179 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 CNOT10Q9H9A5 744 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 PELI2Q9HAT8 420 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 APOBEC3GQ9HC16 384 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ZBTB20Q9HC78 741 aaPredicted RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TRPC7Q9HCX4 862 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 TCF7L2Q9NQB0 619 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ABCF3Q9NUQ8 709 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 OSER1Q9NX31 292 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 B3GAT1Q9P2W7 334 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ZNF112Q9UJU3 913 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 MTUS1Q9ULD2 1270 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 ABT1Q9ULW3 272 aaKnown RBP1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 GRIP1Q9Y3R0 1128 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 LIPGQ9Y5X9 500 aa1.79□□□□□ -2.12
NUCKS1-202ENST00000464938 NEMP2A6NFY4 417 aa1.78□□□□□ -2.12
NUCKS1-202ENST00000464938 E9PI62 339 aa1.78□□□□□ -2.12
NUCKS1-202ENST00000464938 C16orf97H3BN30 126 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms