RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 TM9SF1O15321 606 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ZWINTO95229 277 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 MATN4O95460 622 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 RBP1P09455 135 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC35G4P0C7Q5 338 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 CCDC6Q16204 474 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 CCDC153Q494R4 210 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 TRIM61Q5EBN2 209 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 TECRLQ5HYJ1 363 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 RABEPKQ7Z6M1 372 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 TMEM151AQ8N4L1 468 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 STAG3L4Q8TBR4 150 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ASB11Q8WXH4 323 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 DLG3Q92796 817 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 LOXL4Q96JB6 756 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 PRRX2Q99811 253 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 MRPL57Q9BQC6 102 aaKnown RBP12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 MRPL46Q9H2W6 279 aaKnown RBP12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ERVMER34-1Q9H9K5 563 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 NKIRAS1Q9NYS0 192 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 CFAP20Q9Y6A4 193 aaKnown RBP12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 SDC3O75056 442 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 PROCP04070 461 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ACADLP28330 430 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ATP1A2P50993 1020 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 GRIK2Q13002 908 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 PDZD3Q86UT5 571 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 LMX1AQ8TE12 382 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 DENND1AQ8TEH3 1009 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 RMDN2Q96LZ7 410 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 FOPNLQ96NB1 174 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 UTP6Q9NYH9 597 aaKnown RBP12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 RNF112Q9ULX5 631 aa12.48□□□□□ -0.41
SUPT20H-204ENST00000464572 ANKRD12Q6UB98 2062 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 TP53BP1Q12888 1972 aaPredicted RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 IFRD1O00458 451 aaPredicted RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 EPN2O95208 641 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 EML2O95834 649 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SBK3P0C264 359 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 MPLP40238 635 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC18A1P54219 525 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 CLCA4Q14CN2 919 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ELOCQ15369 112 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 UAP1L1Q3KQV9 507 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SBSNQ6UWP8 590 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 UBE2R2Q712K3 238 aaPredicted RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ADAMTSL2Q86TH1 951 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 RHEBL1Q8TAI7 183 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 TFGQ92734 400 aaPredicted RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 EXT2Q93063 718 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ELF4Q99607 663 aaPredicted RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 PAIP2Q9BPZ3 127 aaKnown RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ZDHHC5Q9C0B5 715 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 CAPN10Q9HC96 672 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 TAAR2Q9P1P5 351 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SPASTQ9UBP0 616 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC6A14Q9UN76 642 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 GFYI3L273 518 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 C8GP07360 202 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ETV4P43268 484 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 PHKG1Q16816 387 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 CAPRIN2Q6IMN6 1127 aaKnown RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC23A3Q6PIS1 610 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 PHC3Q8NDX5 983 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 FAM76AQ8TAV0 307 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 C12orf66Q96MD2 445 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ATOH8Q96SQ7 321 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 INSM2Q96T92 566 aaPredicted RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SMOC1Q9H4F8 434 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 SCHIP1Q9P0W5 487 aaPredicted RBP12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ASF1AQ9Y294 204 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 GPR179Q6PRD1 2367 aa12.47□□□□□ -0.41
SUPT20H-204ENST00000464572 ARHGEF17Q96PE2 2063 aaPredicted RBP12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 OR52A4PA6NMU1 304 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 TARM1B6A8C7 271 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 KERAO60938 352 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 PIAS2O75928 621 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 CHN1P15882 459 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 ARRB1P49407 418 aaPredicted RBP12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 ABRAXAS1Q6UWZ7 409 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 FRA10AC1Q70Z53 315 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 GPSM1Q86YR5 675 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 ZNF548Q8NEK5 533 aaPredicted RBP12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 SLC12A9Q9BXP2 914 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 IMP3Q9NV31 184 aaKnown RBP12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 PCDHGA5Q9Y5G8 931 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 TMEM131Q92545 1883 aa12.46□□□□□ -0.41
SUPT20H-204ENST00000464572 TRBV23OR9-2A0A075B6M9 112 aa12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 NCF1BA6NI72 391 aaPredicted RBP12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 NCF1CA8MVU1 366 aaPredicted RBP12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 AQP9O43315 295 aa12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 PSIP1O75475 530 aaKnown RBP12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 NCF1P14598 390 aaPredicted RBP12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 HALP42357 657 aa12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 WDR4P57081 412 aaKnown RBP12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 BNIP3Q12983 259 aa12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 PPP1R3AQ16821 1122 aa12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 HLA-BQ31612 363 aa12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 HHATQ5VTY9 493 aa12.46□□□□□ -0.42
SUPT20H-204ENST00000464572 WASH2PQ6VEQ5 465 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms