RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 POMT2Q9UKY4 750 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 BTRCQ9Y297 605 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 PRSS21Q9Y6M0 314 aa18.33■□□□□ 0.52
SF3A1-205ENST00000463818 TENM4Q6N022 2769 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 GSAPA4D1B5 854 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 C21orf140B9A014 251 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 BTN3A3O00478 584 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 SCRG1O75711 98 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 AP2A2O94973 939 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 RECKO95980 971 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 GSTM1P09488 218 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 PRDX3P30048 256 aaKnown RBP18.32■□□□□ 0.52
SF3A1-205ENST00000463818 GSTM4Q03013 218 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 PRKG2Q13237 762 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 CCDC38Q502W7 563 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 TMEM126BQ8IUX1 230 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 DNAAF3Q8N9W5 541 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 RUFY1Q96T51 708 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 TFB2MQ9H5Q4 396 aaKnown RBP18.32■□□□□ 0.52
SF3A1-205ENST00000463818 ETNK1Q9HBU6 452 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 GUCA1BQ9UMX6 200 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 POLHQ9Y253 713 aa18.32■□□□□ 0.52
SF3A1-205ENST00000463818 BOD1L1Q8NFC6 3051 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 CCDC162PA2VCL2 907 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 OR51F1A6NGY5 319 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 MATN2O00339 956 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 BTN3A1O00481 513 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 LIASO43766 372 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 IFNB1P01574 187 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 MSNP26038 577 aaKnown RBP18.31■□□□□ 0.52
SF3A1-205ENST00000463818 NSG1P42857 185 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 TLE1Q04724 770 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 CDH17Q12864 832 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 OASLQ15646 514 aaKnown RBP18.31■□□□□ 0.52
SF3A1-205ENST00000463818 SEL1L2Q5TEA6 688 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 PRAMEF17Q5VTA0 474 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 OR52E1Q8NGJ3 308 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 C1orf54Q8WWF1 131 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 TLR10Q9BXR5 811 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 GPR87Q9BY21 358 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 FRMD8P1Q9BZ68 369 aaPredicted RBP18.31■□□□□ 0.52
SF3A1-205ENST00000463818 ACTL8Q9H568 366 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 XKR8Q9H6D3 395 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 ZNF148Q9UQR1 794 aa18.31■□□□□ 0.52
SF3A1-205ENST00000463818 FARSAQ9Y285 508 aaKnown RBP18.31■□□□□ 0.52
SF3A1-205ENST00000463818 BSNQ9UPA5 3926 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 ERI2A8K979 691 aaKnown RBP18.3■□□□□ 0.52
SF3A1-205ENST00000463818 CPNE3O75131 537 aaKnown RBP18.3■□□□□ 0.52
SF3A1-205ENST00000463818 PTPN4P29074 926 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 FOXN2P32314 431 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 FDFT1P37268 417 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 LMAN1P49257 510 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 RPS15P62841 145 aaKnown RBP18.3■□□□□ 0.52
SF3A1-205ENST00000463818 BOP1Q14137 746 aaKnown RBP18.3■□□□□ 0.52
SF3A1-205ENST00000463818 ITIH4Q14624 930 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 PPP1R21Q6ZMI0 780 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 AMIGO1Q86WK6 493 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 SLC13A5Q86YT5 568 aaPredicted RBP18.3■□□□□ 0.52
SF3A1-205ENST00000463818 SLC38A9Q8NBW4 561 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 MR1Q95460 341 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 HDAC10Q969S8 669 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 LATS2Q9NRM7 1088 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 ANAPC2Q9UJX6 822 aa18.3■□□□□ 0.52
SF3A1-205ENST00000463818 LIN7AO14910 233 aaPredicted RBP18.29■□□□□ 0.52
SF3A1-205ENST00000463818 SUN1O94901 812 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 GAS8O95995 478 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 ETS1P14921 441 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 ST6GAL1P15907 406 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 GRIA1P42261 906 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 RPS18P62269 152 aaKnown RBP18.29■□□□□ 0.52
SF3A1-205ENST00000463818 GPS2Q13227 327 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 SNX1Q13596 522 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 BRD3Q15059 726 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 LACTB2Q53H82 288 aaPredicted RBP18.29■□□□□ 0.52
SF3A1-205ENST00000463818 NAPRTQ6XQN6 538 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 PRUNE1Q86TP1 453 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 ADGRF3Q8IZF5 1079 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 UBE2Q2Q8WVN8 375 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 ELMO1Q92556 727 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 HGH1Q9BTY7 390 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 TSGA10Q9BZW7 698 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 SLC2A6Q9UGQ3 507 aa18.29■□□□□ 0.52
SF3A1-205ENST00000463818 HEATR9A2RTY3 570 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 C2orf74A8MZ97 194 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 E7EVH7 732 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 MKRN2OSH3BPM6 223 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 K7EM74 188 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 QSOX1O00391 747 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 MAP3K7O43318 606 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 KRT86O43790 486 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 FTH1P02794 183 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 KLK3P07288 261 aaPredicted RBP18.28■□□□□ 0.52
SF3A1-205ENST00000463818 CASRP41180 1078 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 LAMB3Q13751 1172 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 PLEKHS1Q5SXH7 462 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 TSTD2Q5T7W7 516 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 LYPLAL1Q5VWZ2 237 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 PACS1Q6VY07 963 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 OR5AR1Q8NGP9 310 aa18.28■□□□□ 0.52
SF3A1-205ENST00000463818 OR13J1Q8NGT2 312 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms