RNA–Protein interactions for RNA: ENST00000463487.1

COL9A3-204, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-204ENST00000463487 UNC5DQ6UXZ4 953 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 NAPRTQ6XQN6 538 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 ZNF761Q86XN6 746 aaPredicted RBP19.31■□□□□ 0.68
COL9A3-204ENST00000463487 TBC1D21Q8IYX1 336 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 GPATCH11Q8N954 259 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 LRRN4CLQ8ND94 238 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 ACVR1CQ8NER5 493 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 FBF1Q8TES7 1133 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL9A3-204ENST00000463487 FAM136AQ96C01 138 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 RP1P56715 2156 aa19.31■□□□□ 0.68
COL9A3-204ENST00000463487 A0A1W2PQM1 296 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 FAM159BA6NKW6 160 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 EIF3FO00303 357 aaPredicted RBP19.3■□□□□ 0.68
COL9A3-204ENST00000463487 B4GAT1O43505 415 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 ECHS1P30084 290 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 GP5P40197 560 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 RGS4P49798 205 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 PDAP1Q13442 181 aaKnown RBP19.3■□□□□ 0.68
COL9A3-204ENST00000463487 SQSTM1Q13501 440 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 KYNUQ16719 465 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 CDCP2Q5VXM1 449 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 ZNF549Q6P9A3 640 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 PLXDC1Q8IUK5 500 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 DCBLD1Q8N8Z6 715 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 MAGEC3Q8TD91 643 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 INPP5DQ92835 1189 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 VPS39Q96JC1 886 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 CYTH2Q99418 400 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 NDNQ99608 321 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 TBC1D10AQ9BXI6 508 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 STRADBQ9C0K7 418 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 CDC42EP4Q9H3Q1 356 aaKnown RBP19.3■□□□□ 0.68
COL9A3-204ENST00000463487 RHOJQ9H4E5 214 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 SLC17A6Q9P2U8 582 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 ANGPTL2Q9UKU9 493 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 CDYLQ9Y232 598 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 DHRS7Q9Y394 339 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 ASXL3Q9C0F0 2248 aa19.3■□□□□ 0.68
COL9A3-204ENST00000463487 DCHS1Q96JQ0 3298 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 FAM221BA6H8Z2 402 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 CSO75390 466 aaKnown RBP19.29■□□□□ 0.68
COL9A3-204ENST00000463487 PROS1P07225 676 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 CD9P21926 228 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 MCM3P25205 808 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 ACADLP28330 430 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 GABRB3P28472 473 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 TNFRSF8P28908 595 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 CD1CP29017 333 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 CLCN7P51798 805 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 SLC12A2P55011 1212 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 ARMC6Q6NXE6 501 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 DUS1LQ6P1R4 473 aaKnown RBP19.29■□□□□ 0.68
COL9A3-204ENST00000463487 WDR74Q6RFH5 385 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-204ENST00000463487 NEK10Q6ZWH5 1172 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 ZC3HC1Q86WB0 502 aaKnown RBP19.29■□□□□ 0.68
COL9A3-204ENST00000463487 RAB42Q8N4Z0 105 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 PPM1NQ8N819 430 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 SIDT2Q8NBJ9 832 aaKnown RBP19.29■□□□□ 0.68
COL9A3-204ENST00000463487 OR5K2Q8NHB8 316 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 CFAP61Q8NHU2 1237 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 LCN9Q8WX39 176 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 NCSTNQ92542 709 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 UBXN4Q92575 508 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 ELMO2Q96JJ3 720 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 GPR21Q99679 349 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 HGH1Q9BTY7 390 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 NINJ2Q9NZG7 142 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 AKAP7Q9P0M2 348 aaPredicted RBP19.29■□□□□ 0.68
COL9A3-204ENST00000463487 SLC24A2Q9UI40 661 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 NEUROG3Q9Y4Z2 214 aa19.29■□□□□ 0.68
COL9A3-204ENST00000463487 F7P08709 466 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-204ENST00000463487 CCNFP41002 786 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 INHBCP55103 352 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 ABRQ12979 859 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 PRKAA1Q13131 559 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 KBTBD12Q3ZCT8 623 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 GRTP1Q5TC63 336 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 HECTD2Q5U5R9 776 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 USP53Q70EK8 1073 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 TRMT10CQ7L0Y3 403 aaKnown RBP19.28■□□□□ 0.68
COL9A3-204ENST00000463487 OOSP2Q86WS3 158 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 VRK3Q8IV63 474 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 DCUN1D3Q8IWE4 304 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 OR4D9Q8NGE8 314 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 ATXN7L3BQ96GX2 97 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 SCNM1Q9BWG6 230 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 RDH14Q9HBH5 336 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 ATXN7L1Q9ULK2 861 aaPredicted RBP19.28■□□□□ 0.68
COL9A3-204ENST00000463487 VWA7Q9Y334 891 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 PSAT1Q9Y617 370 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 IKBKGQ9Y6K9 419 aa19.28■□□□□ 0.68
COL9A3-204ENST00000463487 FAM95CA0A1B0GW59 222 aa19.27■□□□□ 0.68
COL9A3-204ENST00000463487 MATN2O00339 956 aa19.27■□□□□ 0.68
COL9A3-204ENST00000463487 ACSL3O95573 720 aa19.27■□□□□ 0.68
COL9A3-204ENST00000463487 TYRP1P17643 537 aa19.27■□□□□ 0.68
COL9A3-204ENST00000463487 SHMT2P34897 504 aa19.27■□□□□ 0.68
COL9A3-204ENST00000463487 SPRP35270 261 aaPredicted RBP19.27■□□□□ 0.68
COL9A3-204ENST00000463487 CAPZBP47756 277 aa19.27■□□□□ 0.68
COL9A3-204ENST00000463487 SHC2P98077 582 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms