RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ALDH8A1Q9H2A2 487 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SEMA6AQ9H2E6 1030 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 GOLPH3LQ9H4A5 285 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 OPA3Q9H6K4 179 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 MIOSQ9NXC5 875 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SPHK1Q9NYA1 384 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 RHCGQ9UBD6 479 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 LEF1Q9UJU2 399 aaPredicted RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 CPSF3Q9UKF6 684 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 POU2F3Q9UKI9 436 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 ABT1Q9ULW3 272 aaKnown RBP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 SNX7Q9UNH6 387 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.91□□□□□ -1.94
HDAC6-212ENST00000461608 POMT1Q9Y6A1 747 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PRAG1Q86YV5 1406 aa2.91□□□□□ -1.94
HDAC6-212ENST00000461608 PRSS51A0A1B0GVH4 220 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 A0A1W2PPQ1 181 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 A0A1W2PS18 150 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 TMEM221A6NGB7 291 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 HEPACAM2A8MVW5 462 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 HNRNPCL2B2RXH8 293 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 TRIM77I1YAP6 450 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SLCO2B1O94956 709 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 PENKP01210 267 aaPredicted RBP2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ACAA1P09110 424 aaPredicted RBP2.9□□□□□ -1.95
HDAC6-212ENST00000461608 MYL6BP14649 208 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 MUTP22033 750 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 TNNT3P45378 269 aaPredicted RBP2.9□□□□□ -1.95
HDAC6-212ENST00000461608 NR2C2P49116 596 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 MMP15P51511 669 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 LTBQ06643 244 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SLC20A2Q08357 652 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ACSM1Q08AH1 577 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 KIF5AQ12840 1032 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 CUL3Q13618 768 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 FHL1Q13642 323 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SLC39A14Q15043 492 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 UGCGQ16739 394 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 CDO1Q16878 200 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 KIF19Q2TAC6 998 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ELFN2Q5R3F8 820 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 C1QTNF12Q5T7M4 302 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SHEQ5VZ18 495 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 AWAT2Q6E213 333 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 OR7E24Q6IFN5 339 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 MFSD12Q6NUT3 480 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ENPP7Q6UWV6 458 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 GFRALQ6UXV0 394 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 UNQ6126/PRO20091Q6UXV3 157 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ZBTB49Q6ZSB9 765 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 DNAJB7Q7Z6W7 309 aaPredicted RBP2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ABI3BPQ7Z7G0 1075 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 TLK2Q86UE8 772 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 TMPRSS12Q86WS5 348 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 NUDT13Q86X67 352 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 CEP57L1Q8IYX8 460 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 GBGT1Q8N5D6 347 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 GDAP1Q8TB36 358 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 HMGCLL1Q8TB92 370 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SLC20A1Q8WUM9 679 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SECTM1Q8WVN6 248 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SCRN2Q96FV2 425 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 OXNAD1Q96HP4 312 aaPredicted RBP2.9□□□□□ -1.95
HDAC6-212ENST00000461608 HES6Q96HZ4 224 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SGK494Q96LW2 274 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF558Q96NG5 402 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF582Q96NG8 517 aaPredicted RBP2.9□□□□□ -1.95
HDAC6-212ENST00000461608 C16orf70Q9BSU1 422 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 LRRC1Q9BTT6 524 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 IL25Q9H293 177 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SLA2Q9H6Q3 261 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 KLHL1Q9NR64 748 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 OLFML3Q9NRN5 406 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 GKN1Q9NS71 199 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 ABCF3Q9NUQ8 709 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 OCIAD1Q9NX40 245 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 NPAP1Q9NZP6 1156 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 OR2W1Q9Y3N9 320 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 SPIN1Q9Y657 262 aaPredicted RBP2.9□□□□□ -1.95
HDAC6-212ENST00000461608 CGNL1Q0VF96 1302 aa2.9□□□□□ -1.95
HDAC6-212ENST00000461608 IGHV4OR15-8A0A075B7B6 117 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 A0A1W2PPM1 405 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 ASPDHA6ND91 283 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 INSIG1O15503 277 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 SYNGR3O43761 229 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 OR10H2O60403 315 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 LDB3O75112 727 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 LUC7L3O95232 432 aaKnown RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 BAG2O95816 211 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 NGFRP08138 427 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 INHBAP08476 426 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 VIMP08670 466 aaKnown RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 CDH1P12830 882 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 ZNF12P17014 697 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 HOXC13P31276 330 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 GABRA5P31644 462 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 TCF7P36402 384 aaPredicted RBP2.89□□□□□ -1.95
HDAC6-212ENST00000461608 PSMC4P43686 418 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 LHX1P48742 406 aa2.89□□□□□ -1.95
HDAC6-212ENST00000461608 HTR6P50406 440 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms