RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 ASB11Q8WXH4 323 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 GLMNQ92990 594 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 RHBDF1Q96CC6 855 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 SLC6A18Q96N87 628 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 TSNARE1Q96NA8 513 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 IL17FQ96PD4 163 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 TMEM120AQ9BXJ8 343 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 BTBD1Q9H0C5 482 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 OR52A5Q9H2C5 316 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 WDR26Q9H7D7 661 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 SCHIP1Q9P0W5 487 aaPredicted RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 HAO1Q9UJM8 370 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 PTBP2Q9UKA9 531 aaKnown RBP8.54□□□□□ -1.04
RIF1-208ENST00000457745 PLAGL1Q9UM63 463 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 SUFUQ9UMX1 484 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 PSMD13Q9UNM6 376 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 KCNK6Q9Y257 313 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 SLC17A4Q9Y2C5 497 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 OARD1Q9Y530 152 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 GON4LQ3T8J9 2241 aa8.54□□□□□ -1.04
RIF1-208ENST00000457745 TMEM114B3SHH9 223 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 CFAP99D6REC4 459 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 GFYI3L273 518 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 E2F3O00716 465 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 OR7A17O14581 309 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PFDN6O15212 129 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 FFAR2O15552 330 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 NPHS1O60500 1241 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 MAGEC1O60732 1142 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 ATG13O75143 517 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 MATN4O95460 622 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 HSPA4LO95757 839 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 FTH1P02794 183 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 APOA4P06727 396 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 NEFHP12036 1026 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 CD46P15529 392 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 ALOX15P16050 662 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 IMPDH1P20839 514 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 DGKAP23743 735 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 AK4P27144 223 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 SERPINB3P29508 390 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 CD6P30203 668 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 SKIV2L2P42285 1042 aaKnown RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 HERVK_113P63132 956 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 SH3BP2P78314 561 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 EIF2B5Q13144 721 aaKnown RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 SGCGQ13326 291 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 ALG11Q2TAA5 492 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 UGT3A2Q3SY77 523 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PYCR3Q53H96 274 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 ZNF542PQ5EBM4 170 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PLEKHS1Q5SXH7 462 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 NEK5Q6P3R8 708 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 KLC3Q6P597 504 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 UBE2R2Q712K3 238 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 CUZD1Q86UP6 607 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 CFAP206Q8IYR0 622 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 SYNPOQ8N3V7 929 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 SPEM1Q8N4L4 309 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PPFIBP2Q8ND30 876 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PHC3Q8NDX5 983 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 OR52B6Q8NGF0 335 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PPP1R14CQ8TAE6 165 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 RAB3IL1Q8TBN0 382 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 STAG3L4Q8TBR4 150 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 TRPC4APQ8TEL6 797 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 JPH3Q8WXH2 748 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 ASB12Q8WXK4 309 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 TSACCQ96A04 125 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 SCARF2Q96GP6 870 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 LINC00615Q96LM1 132 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 PPP1R36Q96LQ0 422 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 C3orf30Q96M34 536 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 CDK15Q96Q40 435 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PANX3Q96QZ0 392 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 OR52B2Q96RD2 323 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 PKP4Q99569 1192 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 ERVK-6Q9BXR3 956 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 WWP1Q9H0M0 922 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 TUBB1Q9H4B7 451 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 SGK2Q9HBY8 427 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 SEMA4BQ9NPR2 832 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 GPR27Q9NS67 375 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 KLC4Q9NSK0 619 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 THAP1Q9NVV9 213 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 NUDT4Q9NZJ9 180 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 CD274Q9NZQ7 290 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 KLHL42Q9P2K6 505 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 SCML1Q9UN30 329 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 NCKAP1Q9Y2A7 1128 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 FIS1Q9Y3D6 152 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 CFAP20Q9Y6A4 193 aaKnown RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 USH1CQ9Y6N9 552 aa8.53□□□□□ -1.04
RIF1-208ENST00000457745 TDRD6O60522 2096 aaKnown RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 SNRNP200O75643 2136 aaKnown RBP8.53□□□□□ -1.04
RIF1-208ENST00000457745 TMEM131Q92545 1883 aa8.52□□□□□ -1.05
RIF1-208ENST00000457745 A0A0G2JND7 137 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms