RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 KCTD11Q693B1 232 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FSTL4Q6MZW2 842 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 KIAA1161Q6NSJ0 714 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 RINT1Q6NUQ1 792 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PMF1Q6P1K2 205 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ABHD17CQ6PCB6 329 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TTC33Q6PID6 262 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 CES3Q6UWW8 571 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CYP4V2Q6ZWL3 525 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 FAM122BQ7Z309 247 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 AMZ2Q86W34 360 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TBC1D10CQ8IV04 446 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CHERPQ8IWX8 916 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 IQCKQ8N0W5 287 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 WDTC1Q8N5D0 677 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FRMD1Q8N878 549 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ENDOVQ8N8Q3 282 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 CHST14Q8NCH0 376 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 OR6B3Q8NGW1 331 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 OR2T34Q8NGX1 318 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 OR14C36Q8NHC7 312 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ADAMTS16Q8TE57 1224 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TGFBRAP1Q8WUH2 860 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 GLMPQ8WWB7 406 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CPT1BQ92523 772 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 RASD2Q96D21 266 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PHACTR3Q96KR7 559 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 APOLD1Q96LR9 279 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 NSMCE3Q96MG7 304 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 INPP4AQ96PE3 977 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 SSX3Q99909 188 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CNPY3Q9BT09 278 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CHID1Q9BWS9 393 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 ABHD16BQ9H3Z7 469 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TAF1DQ9H5J8 278 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 DHX33Q9H6R0 707 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 ZNF703Q9H7S9 590 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 CYP3A43Q9HB55 503 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 MRPL47Q9HD33 250 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 MBNL1Q9NR56 388 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 ETNK2Q9NVF9 386 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 FBXO34Q9NWN3 711 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 VSX1Q9NZR4 365 aaPredicted RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 CNIH4Q9P003 139 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PI4KBQ9UBF8 816 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TRPC4Q9UBN4 977 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 DCDC2Q9UHG0 476 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 CPA4Q9UI42 421 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 DNPEPQ9ULA0 475 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 RUVBL2Q9Y230 463 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 NCKAP1Q9Y2A7 1128 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 BTBD3Q9Y2F9 522 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 KCNK7Q9Y2U2 307 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 TDRKHQ9Y2W6 561 aaKnown RBP5.34□□□□□ -1.55
VPS41-209ENST00000457055 RNF215Q9Y6U7 377 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 MAU2Q9Y6X3 613 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 U3KQV3 271 aa5.34□□□□□ -1.55
VPS41-209ENST00000457055 PRAG1Q86YV5 1406 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ANKRD50Q9ULJ7 1429 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 C2orf92A0A1B0GVN3 265 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 FAM234BA2RU67 622 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 FUOMA2VDF0 154 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 VWA3AA6NCI4 1184 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 C12orf71A8MTZ7 269 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MIF4GDA9UHW6 222 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 PRSS44E7EML9 344 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PLK4O00444 970 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PIP5K1BO14986 540 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 TLX2O43763 284 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 CALUO43852 315 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 ATP9AO75110 1047 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 SCGB2A1O75556 95 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 DDNO94850 711 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 SORBS2O94875 1100 aaKnown RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 AHSA1O95433 338 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 VNN2O95498 520 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 C22orf31O95567 290 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CH25HO95992 272 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 F9P00740 461 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 SERPINA3P01011 423 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CALCAP01258 141 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 ITGA5P08648 1049 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 GNSP15586 552 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MAKP20794 623 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 SYT1P21579 422 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CDC25AP30304 524 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 AVPR2P30518 371 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 HOXA9P31269 272 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 SLC1A4P43007 532 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 MCAMP43121 646 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 PTPN9P43378 593 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 FASLGP48023 281 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 CEBPDP49716 269 aaPredicted RBP5.33□□□□□ -1.56
VPS41-209ENST00000457055 LIG4P49917 911 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 KHKP50053 298 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 GNAQP50148 359 aa5.33□□□□□ -1.56
VPS41-209ENST00000457055 SMSP52788 366 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms