RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 PDK4Q16654 411 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 PHKG1Q16816 387 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 LAYNQ6UX15 382 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 UNC5DQ6UXZ4 953 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 ARMCX6Q7L4S7 300 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 PHACTR4Q8IZ21 702 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 RGL4Q8IZJ4 473 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 PDPRQ8NCN5 879 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 CKAP2Q8WWK9 683 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 RMDN2Q96LZ7 410 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 C1QTNF3Q9BXJ4 246 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 MIR1-1HGQ9H1L0 117 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 CPSF2Q9P2I0 782 aaKnown RBP16.28■□□□□ 0.2
LINC00963-208ENST00000454968 TMCO1Q9UM00 188 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 GPSM3Q9Y4H4 160 aa16.28■□□□□ 0.2
LINC00963-208ENST00000454968 CABIN1Q9Y6J0 2220 aa16.27■□□□□ 0.2
LINC00963-208ENST00000454968 KLF11O14901 512 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 ALDH3A1P30838 453 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 CTSKP43235 329 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 DHPSP49366 369 aaPredicted RBP16.27■□□□□ 0.19
LINC00963-208ENST00000454968 PRKAA2P54646 552 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 BNC1Q01954 994 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 HHATQ5VTY9 493 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 SYT12Q8IV01 421 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 HID1Q8IV36 788 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 RAB3IL1Q8TBN0 382 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 SKA1Q96BD8 255 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 CCDC126Q96EE4 140 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 SCYL1Q96KG9 808 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 TCEAL2Q9H3H9 227 aaPredicted RBP16.27■□□□□ 0.19
LINC00963-208ENST00000454968 PARVBQ9HBI1 364 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 MLXIPLQ9NP71 852 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 NUDT4Q9NZJ9 180 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 PDE10AQ9Y233 779 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 KCNK6Q9Y257 313 aa16.27■□□□□ 0.19
LINC00963-208ENST00000454968 A8MT66 165 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 ARHGEF33A8MVX0 844 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 C1orf105O95561 183 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 TPBGLP0DKB5 382 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 FGF3P11487 239 aaPredicted RBP16.26■□□□□ 0.19
LINC00963-208ENST00000454968 GNSP15586 552 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 IDSP22304 550 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 RXRGP48443 463 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 CSNK1EP49674 416 aaKnown RBP16.26■□□□□ 0.19
LINC00963-208ENST00000454968 GYS2P54840 703 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 AP1S2P56377 157 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 IL9RQ01113 521 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 GUCY1A3Q02108 690 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 TEAD4Q15561 434 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 SEPT7Q16181 437 aaKnown RBP16.26■□□□□ 0.19
LINC00963-208ENST00000454968 UAP1L1Q3KQV9 507 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.26■□□□□ 0.19
LINC00963-208ENST00000454968 GPSM1Q86YR5 675 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 C10orf107Q8IVU9 208 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 SDR16C5Q8N3Y7 309 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 CCL4L1Q8NHW4 92 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 MGARPQ8TDB4 240 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 LOXL4Q96JB6 756 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 MAGEB18Q96M61 343 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 LRRC61Q9BV99 259 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 TBC1D29Q9UFV1 150 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 MOSPD1Q9UJG1 213 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 RNF112Q9ULX5 631 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 DNAJC16Q9Y2G8 782 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 WDR37Q9Y2I8 494 aa16.26■□□□□ 0.19
LINC00963-208ENST00000454968 ARID1BQ8NFD5 2236 aaPredicted RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 NEMP2A6NFY4 417 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 STX16-NPEPL1H3BU86 382 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 UBXN8O00124 270 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 MYO1CO00159 1063 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 STX16O14662 325 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 POLR3GO15318 223 aaPredicted RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 FFAR2O15552 330 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 IPO13O94829 963 aaKnown RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 MYL2P10916 166 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 KCNA4P22459 653 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 GGT5P36269 586 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 IRX4P78413 519 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 ILF3Q12906 894 aaKnown RBP eCLIP16.25■□□□□ 0.192e-6■■■■□ 22.1
LINC00963-208ENST00000454968 SIM2Q14190 667 aaPredicted RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 TUBB8Q3ZCM7 444 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 LIPMQ5VYY2 423 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 METTL2BQ6P1Q9 378 aaKnown RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 UBE2R2Q712K3 238 aaPredicted RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 SLC22A9Q8IVM8 553 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 SPDYE1Q8NFV5 336 aaPredicted RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 L3HYPDHQ96EM0 354 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 MECRQ9BV79 373 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 GSDMCQ9BYG8 508 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 APOBEC3BQ9UH17 382 aaKnown RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 PTBP2Q9UKA9 531 aaKnown RBP16.25■□□□□ 0.19
LINC00963-208ENST00000454968 ADAM21Q9UKJ8 722 aa16.25■□□□□ 0.19
LINC00963-208ENST00000454968 TRIM13O60858 407 aa16.24■□□□□ 0.19
LINC00963-208ENST00000454968 SHOX2O60902 331 aaPredicted RBP16.24■□□□□ 0.19
LINC00963-208ENST00000454968 CATP04040 527 aaKnown RBP16.24■□□□□ 0.19
LINC00963-208ENST00000454968 SLC35G4P0C7Q5 338 aa16.24■□□□□ 0.19
LINC00963-208ENST00000454968 JUNDP17535 347 aa16.24■□□□□ 0.19
LINC00963-208ENST00000454968 TAC1P20366 129 aa16.24■□□□□ 0.19
LINC00963-208ENST00000454968 AK4P27144 223 aaPredicted RBP16.24■□□□□ 0.19
LINC00963-208ENST00000454968 RPIAP49247 311 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms