RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 ADGRG6Q86SQ4 1221 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 ALYREFQ86V81 257 aaKnown RBP6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SPATA6LQ8N4H0 392 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SLC44A3Q8N4M1 653 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 HDDC3Q8N4P3 179 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 CLDN19Q8N6F1 224 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 TWIST2Q8WVJ9 160 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 STARD8Q92502 1023 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 MCUR1Q96AQ8 359 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 REPS1Q96D71 796 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 WDR34Q96EX3 536 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SHDQ96IW2 340 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 EBF4Q9BQW3 602 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 RAB11FIP5Q9BXF6 653 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 TBC1D10AQ9BXI6 508 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 BRINP2Q9C0B6 783 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 UBE2ZQ9H832 354 aaPredicted RBP6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 CYP4F12Q9HCS2 524 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 CD248Q9HCU0 757 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 ARL8BQ9NVJ2 186 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 ARL15Q9NXU5 204 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 ZIM2Q9NZV7 527 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SPATA7Q9P0W8 599 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 GALPQ9UBC7 116 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 MMP17Q9ULZ9 603 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 SNX6Q9UNH7 406 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 DNAJC15Q9Y5T4 150 aa6.69□□□□□ -1.34
ECHDC1-210ENST00000454859 H3BM21 787 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 UBFD1O14562 309 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 TNFRSF10CO14798 259 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 GSC2O15499 205 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 RGS14O43566 566 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 CLDN9O95484 217 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 MYCLP1P12525 358 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 COX4I1P13073 169 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 HLA-EP13747 358 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 HOXB6P17509 224 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 NCF2P19878 526 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 MAPK1P28482 360 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 YPEL5P62699 121 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 ARHGAP8P85298 464 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 EMX2Q04743 252 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 DLX2Q07687 328 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 TRMT5Q32P41 509 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 RAET1GQ6H3X3 334 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 TMEM220Q6QAJ8 160 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 GOLGA7Q7Z5G4 137 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 NET1Q7Z628 596 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 MILR1Q7Z6M3 343 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 LRRTM4Q86VH4 590 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 HORMAD1Q86X24 394 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 RAB42Q8N4Z0 105 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 IL17RCQ8NAC3 791 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PCYOX1LQ8NBM8 494 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 GLB1L3Q8NCI6 653 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 OR56A3Q8NH54 315 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 MAPK15Q8TD08 544 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 TRPC4APQ8TEL6 797 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 JADE3Q92613 823 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 SCAMP4Q969E2 229 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 UBE2E3Q969T4 207 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 EGFL8Q99944 293 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 APOL5Q9BWW9 433 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 NUF2Q9BZD4 464 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 SLC40A1Q9NP59 571 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 SDR39U1Q9NRG7 319 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 HEBP1Q9NRV9 189 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 DNAJC11Q9NVH1 559 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 NMRK1Q9NWW6 199 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 TAS2R1Q9NYW7 299 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PRDM4Q9UKN5 801 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 DMTF1Q9Y222 760 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PDE10AQ9Y233 779 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 NDUFAF1Q9Y375 327 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 HEBP2Q9Y5Z4 205 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PIAS3Q9Y6X2 628 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 ZFC3H1O60293 1989 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 MYO9BQ13459 2157 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PLXND1Q9Y4D7 1925 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 C15orf38-AP3S2A0A0A6YYH1 394 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 LRRC72A6NJI9 287 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PRR5-ARHGAP8B1AHC4 643 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 B2RBV5 119 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 TAPBPO15533 448 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PRMT3O60678 531 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 DNAJA2O60884 412 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 CIB2O75838 187 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 APBB3O95704 486 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 HOXB2P14652 356 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PIK3R1P27986 724 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 GSTM2P28161 218 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 DGKEP52429 567 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 ELF3P78545 371 aaPredicted RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 CDK3Q00526 305 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 LRRC74AQ0VAA2 488 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 CSTF3Q12996 717 aaKnown RBP6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 TDGQ13569 410 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 PTPRRQ15256 657 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 RBBP7Q16576 425 aa6.68□□□□□ -1.34
ECHDC1-210ENST00000454859 AAK1Q2M2I8 961 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms