RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 TAGAPQ8N103 731 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 CYB5D2Q8WUJ1 264 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 BORCS5Q969J3 196 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 CEP295NLQ96MC4 621 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 TSGA13Q96PP4 275 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 MRPS26Q9BYN8 205 aaKnown RBP10.99□□□□□ -0.65
DDR1-240ENST00000454612 FANCEQ9HB96 536 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 TMEM39AQ9NV64 488 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 TMEM161AQ9NX61 479 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 SCML2Q9UQR0 700 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 ASB1Q9Y576 335 aa10.99□□□□□ -0.65
DDR1-240ENST00000454612 KRT6AP02538 564 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 KRT6BP04259 564 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 COX7A2P14406 83 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 RPS9P46781 194 aaKnown RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 LEPRP48357 1165 aaKnown RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 KRT6CP48668 564 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 YBEYP58557 167 aaPredicted RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 MYBPC1Q00872 1141 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 SEMA3BQ13214 749 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 PGM2L1Q6PCE3 622 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CRTC3Q6UUV7 619 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 C2orf49Q9BVC5 232 aaPredicted RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 RNF38Q9H0F5 515 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CTPS2Q9NRF8 586 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 PNPLA3Q9NST1 481 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 SLCO3A1Q9UIG8 710 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 H3BNX3 289 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 PRKD3O94806 890 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CRATP43155 626 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 NAE1Q13564 534 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CCDC85BQ15834 202 aaPredicted RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 NANOGP8Q6NSW7 305 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CYP20A1Q6UW02 462 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 HMGN2P46Q86SG4 172 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 APCDD1Q8J025 514 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 FIBCD1Q8N539 461 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 FOXJ1Q92949 421 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 WBP2Q969T9 261 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CEP19Q96LK0 163 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 OSBPL6Q9BZF3 934 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 NANOGQ9H9S0 305 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 RAPGEFL1Q9UHV5 662 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 ZNF451Q9Y4E5 1061 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CFAP20Q9Y6A4 193 aaKnown RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 GLYATL1P3A0A0U1RQE8 302 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 LZTS3O60299 673 aaPredicted RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 MYO1DO94832 1006 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 H6PDO95479 791 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 MLYCDO95822 493 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 PRKAG1P54619 331 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 RFTN2Q52LD8 501 aaPredicted RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 XKR6Q5GH73 641 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 KCTD8Q6ZWB6 473 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 CMTR2Q8IYT2 770 aaKnown RBP10.98□□□□□ -0.65
DDR1-240ENST00000454612 BIRC7Q96CA5 298 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 COPS8Q99627 209 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 VPS51Q9UID3 782 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 SLC22A14Q9Y267 594 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 VPS9D1Q9Y2B5 631 aa10.98□□□□□ -0.65
DDR1-240ENST00000454612 A0A1B0GVM2 712 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 RGS14O43566 566 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 PRAMEF11O60813 436 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 SERPINI2O75830 405 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 OXSR1O95747 527 aaPredicted RBP10.97□□□□□ -0.65
DDR1-240ENST00000454612 B3GALT4O96024 378 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 ANXA5P08758 320 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 SLC7A1P30825 629 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 MERTKQ12866 999 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 ABRAXAS2Q15018 415 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 TJAP1Q5JTD0 557 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 C6orf136Q5SQH8 315 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.97□□□□□ -0.65
DDR1-240ENST00000454612 Q6ZVU0 165 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 CYS1Q717R9 158 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 CLEC14AQ86T13 490 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 UROC1Q96N76 676 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 TRMOQ9BU70 441 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 PRDM8Q9NQV8 689 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 CMTM6Q9NX76 183 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 EBF1Q9UH73 591 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 HNRNPCL2B2RXH8 293 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 RFXANKO14593 260 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 TRIM24O15164 1050 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 SEMA3DO95025 777 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 ENO2P09104 434 aaPredicted RBP10.97□□□□□ -0.65
DDR1-240ENST00000454612 SELPP16109 830 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 PORP16435 677 aaPredicted RBP10.97□□□□□ -0.65
DDR1-240ENST00000454612 FMO3P31513 532 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 RXRGP48443 463 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 YBX1P67809 324 aaKnown RBP10.97□□□□□ -0.65
DDR1-240ENST00000454612 ACSM2AQ08AH3 577 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 MEP1AQ16819 746 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 SPDYE7PQ495Y7 208 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 RAB41Q5JT25 222 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 ACSM2BQ68CK6 577 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 ANKRD34AQ69YU3 496 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 PLD3Q8IV08 490 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 ARRDC2Q8TBH0 407 aa10.97□□□□□ -0.65
DDR1-240ENST00000454612 MUS81Q96NY9 551 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms