RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 RBM41Q96IZ5 413 aaKnown RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CNDP1Q96KN2 507 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 C5orf34Q96MH7 638 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CD180Q99467 661 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FSD1LQ9BXM9 530 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NLNQ9BYT8 704 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 UNKQ9C0B0 810 aaKnown RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC7A5P2Q9GIP4 190 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RAB33BQ9H082 229 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SRMSQ9H3Y6 488 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FANCEQ9HB96 536 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FAM60AQ9NP50 221 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PIH1D1Q9NWS0 290 aaKnown RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IRAK4Q9NWZ3 460 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IL17CQ9P0M4 197 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RSPH14Q9UHP6 348 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CRLS1Q9UJA2 301 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ICKQ9UPZ9 632 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 B3GNT3Q9Y2A9 372 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PTRH2Q9Y3E5 179 aaKnown RBP5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PCDHGA10Q9Y5H3 936 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ANKRD12Q6UB98 2062 aa5.81□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NF1P21359 2839 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MYO7BQ6PIF6 2116 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 A0A1W2PQJ5 194 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SSU72P8A0A1W2PR75 194 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SYCE3A1L190 88 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CCDC66A2RUB6 948 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MGAT4DA6NG13 374 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NRP2O60462 931 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CST8O60676 142 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KLF7O75840 302 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CBX6O95503 412 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 F10P00742 488 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KLK3P07288 261 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 UMODP07911 640 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SNRPB2P08579 225 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 UGT2B7P16662 529 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ITGAXP20702 1163 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MCM3P25205 808 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PSMB4P28070 264 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRDX3P30048 256 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HMGCLP35914 325 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FOLR3P41439 243 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CDKN2BP42772 138 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRLHRP49683 370 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF140P52738 457 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CSE1LP55060 971 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GSDMDP57764 484 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZBED6P86452 979 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PRKAA1Q13131 559 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPARCL1Q14515 664 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LONRF2Q1L5Z9 754 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TEX44Q53QW1 395 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZRANB3Q5FWF4 1079 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 FIGNQ5HY92 759 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CRB2Q5IJ48 1285 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DCAF10Q5QP82 559 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LDLRAP1Q5SW96 308 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TMTC4Q5T4D3 741 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 METRNLQ641Q3 311 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CCDC70Q6NSX1 233 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CYB5D1Q6P9G0 228 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CLEC17AQ6ZS10 378 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 KMT5CQ86Y97 462 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RAB43Q86YS6 212 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RAVER1Q8IY67 606 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CFAP206Q8IYR0 622 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GALNT16Q8N428 558 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 C2orf73Q8N5S3 287 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CLDN19Q8N6F1 224 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZNF655Q8N720 491 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 C19orf47Q8N9M1 422 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 OR5AR1Q8NGP9 310 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SLC35G2Q8TBE7 412 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 HM13Q8TCT9 377 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TFB1MQ8WVM0 346 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 MARVELD3Q96A59 401 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SGSM3Q96HU1 749 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 DNAJC1Q96KC8 554 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 TEKT5Q96M29 485 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 GBP4Q96PP9 640 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 QKIQ96PU8 341 aaKnown RBP eCLIP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SMAD5Q99717 465 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 BPIFA3Q9BQP9 254 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 PITPNM3Q9BZ71 974 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPRTNQ9H040 489 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 NAT10Q9H0A0 1025 aaKnown RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 COG4Q9H9E3 785 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 LATS2Q9NRM7 1088 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 RAD18Q9NS91 495 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SMOXQ9NWM0 555 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CUEDC1Q9NWM3 386 aaPredicted RBP5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 P4HTMQ9NXG6 502 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 SPHK1Q9NYA1 384 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 ACTR10Q9NZ32 417 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 IFNKQ9P0W0 207 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 UVRAGQ9P2Y5 699 aa5.8□□□□□ -1.48
HLA-DPA3-207ENST00000454398 CTSFQ9UBX1 484 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms