RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 SEMA6CQ9H3T2 930 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 ZC3H7BQ9UGR2 993 aaKnown RBP19.46■□□□□ 0.71
COL9A3-202ENST00000452372 SATB2Q9UPW6 733 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 SSUH2Q9Y2M2 353 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 CRYL1Q9Y2S2 319 aa19.46■□□□□ 0.71
COL9A3-202ENST00000452372 CCDC187A0A096LP49 1063 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 IGHV5-10-1A0A0J9YXX1 117 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 UBXN7O94888 489 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 ESR1P03372 595 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 ITGB6P18564 788 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 FMO4P31512 558 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 MAPK9P45984 424 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 PPM1FP49593 454 aaPredicted RBP19.45■□□□□ 0.7
COL9A3-202ENST00000452372 PDIA2Q13087 525 aaKnown RBP19.45■□□□□ 0.7
COL9A3-202ENST00000452372 BOP1Q14137 746 aaKnown RBP19.45■□□□□ 0.7
COL9A3-202ENST00000452372 BRD3Q15059 726 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 SYTL3Q4VX76 610 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 CTSL3PQ5NE16 218 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 C8orf74Q6P047 294 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 PCSK4Q6UW60 755 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 NAPRTQ6XQN6 538 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 UNC5AQ6ZN44 842 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 KRT222Q8N1A0 295 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 MMGT1Q8N4V1 131 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 ZNF248Q8NDW4 579 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 WDR36Q8NI36 951 aaKnown RBP19.45■□□□□ 0.7
COL9A3-202ENST00000452372 LKAAEAR1Q8TD35 194 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 NCSTNQ92542 709 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 TMEM159Q96B96 161 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 NAF1Q96HR8 494 aaKnown RBP19.45■□□□□ 0.7
COL9A3-202ENST00000452372 FAM167BQ9BTA0 163 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 LRRC1Q9BTT6 524 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 PLAC1Q9HBJ0 212 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 OGFRQ9NZT2 677 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 PDP2Q9P2J9 529 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 CHMP2BQ9UQN3 213 aa19.45■□□□□ 0.7
COL9A3-202ENST00000452372 BHMG1C9JSJ3 638 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 H3BMM5 538 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 GPC4O75487 556 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 PRB1P04280 392 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 AMD1P17707 334 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 AOAHP28039 575 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 ACADLP28330 430 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 SLC1A2P43004 574 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 PCBP4P57723 403 aaKnown RBP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 CAV1Q03135 178 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 EIF3IQ13347 325 aaKnown RBP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 TRA2AQ13595 282 aaKnown RBP eCLIP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 KRT33BQ14525 404 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 ZNF789Q5FWF6 425 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 C3orf38Q5JPI3 329 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 PHF19Q5T6S3 580 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 STEAP4Q687X5 459 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 DUS1LQ6P1R4 473 aaKnown RBP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 GABPB2Q8TAK5 448 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 TFGQ92734 400 aaPredicted RBP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 ART4Q93070 314 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 FERD3LQ96RJ6 166 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 KIR3DX1Q9H7L2 352 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 IARS2Q9NSE4 1012 aaKnown RBP19.44■□□□□ 0.7
COL9A3-202ENST00000452372 TMEM9Q9P0T7 183 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 FBXO5Q9UKT4 447 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 CDYLQ9Y232 598 aa19.44■□□□□ 0.7
COL9A3-202ENST00000452372 CTAGE15A4D2H0 777 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 KPNA5O15131 536 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 ATXN7O15265 892 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-202ENST00000452372 C1QL1O75973 258 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 APOA4P06727 396 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 CTAGE8P0CG41 777 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 ERVK-10P10266 1014 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 PKMP14618 531 aaKnown RBP19.43■□□□□ 0.7
COL9A3-202ENST00000452372 TYRP1P17643 537 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 HSPA14Q0VDF9 509 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 FRG1Q14331 258 aaKnown RBP19.43■□□□□ 0.7
COL9A3-202ENST00000452372 TRADDQ15628 312 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 RAB11FIP2Q7L804 512 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 GPR155Q7Z3F1 870 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 CTAGE6Q86UF2 777 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 PLXDC1Q8IUK5 500 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 ANKMY2Q8IV38 441 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 CTAGE4Q8IX94 777 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 CERS2Q96G23 380 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 CFAP36Q96G28 342 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 CCDC74BQ96LY2 380 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 ZMYND15Q9H091 742 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 MVB12BQ9H7P6 319 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 FBXO6Q9NRD1 293 aaPredicted RBP19.43■□□□□ 0.7
COL9A3-202ENST00000452372 LATS2Q9NRM7 1088 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 SLC24A2Q9UI40 661 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 PCDHGA8Q9Y5G5 932 aa19.43■□□□□ 0.7
COL9A3-202ENST00000452372 CDRT15L2A8MXV6 281 aa19.42■□□□□ 0.7
COL9A3-202ENST00000452372 HGSO14964 777 aaPredicted RBP19.42■□□□□ 0.7
COL9A3-202ENST00000452372 EIF3HO15372 352 aaKnown RBP eCLIP19.42■□□□□ 0.71e-9■□□□□ 10.4
COL9A3-202ENST00000452372 SLCO2B1O94956 709 aa19.42■□□□□ 0.7
COL9A3-202ENST00000452372 THRAP10827 490 aa19.42■□□□□ 0.7
COL9A3-202ENST00000452372 MPSTP25325 297 aa19.42■□□□□ 0.7
COL9A3-202ENST00000452372 LEPRP48357 1165 aaKnown RBP19.42■□□□□ 0.7
COL9A3-202ENST00000452372 PLTPP55058 493 aa19.42■□□□□ 0.7
COL9A3-202ENST00000452372 CSE1LP55060 971 aaKnown RBP19.42■□□□□ 0.7
COL9A3-202ENST00000452372 SLC7A5Q01650 507 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms