RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 NSG1P42857 185 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 IL2P60568 153 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 SNRPNP63162 240 aaKnown RBP6.45□□□□□ -1.38
USP46-202ENST00000451218 RAD51Q06609 339 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 GGTA1PQ4G0N0 100 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 VN1R5Q7Z5H4 357 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 PGAM4Q8N0Y7 254 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 FBXO39Q8N4B4 442 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 BTN2A2Q8WVV5 523 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 ELSPBP1Q96BH3 223 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 ACPTQ9BZG2 426 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 GPR63Q9BZJ6 419 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 CARS2Q9HA77 564 aaKnown RBP6.45□□□□□ -1.38
USP46-202ENST00000451218 MID1IP1Q9NPA3 183 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 GNPTGQ9UJJ9 305 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 APPL1Q9UKG1 709 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 C15orf41Q9Y2V0 281 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 PKP3Q9Y446 797 aa6.45□□□□□ -1.38
USP46-202ENST00000451218 PDE4DIPQ5VU43 2346 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 BSNQ9UPA5 3926 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 LOC100653049A0A140TA62 436 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 SPECC1L-ADORA2AF8WAN1 911 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 EIF3FO00303 357 aaPredicted RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SCN2BO60939 215 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 XYLBO75191 536 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 KRT34O76011 436 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 SUPT7LO94864 414 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 ANP32DO95626 131 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 TAF12Q16514 161 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 C6orf136Q5SQH8 315 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 METTL2BQ6P1Q9 378 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SDCCAG8Q86SQ7 713 aaPredicted RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SLC22A15Q8IZD6 547 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 DEFB107AQ8IZN7 70 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 L3MBTL4Q8NA19 623 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.44□□□□□ -1.38
USP46-202ENST00000451218 RIOK2Q9BVS4 552 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 HDAC8Q9BY41 377 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 RSPH9Q9H1X1 276 aaPredicted RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SYTL2Q9HCH5 934 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 SPATS2LQ9NUQ6 558 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 NMRK1Q9NWW6 199 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 UTP6Q9NYH9 597 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SLC25A37Q9NYZ2 338 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 RNF112Q9ULX5 631 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 MRPS23Q9Y3D9 190 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 FADS3Q9Y5Q0 445 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 TCRBV3S1A0A5B6 114 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 PSMD11O00231 422 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CBSLP0DN79 551 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 FSHRP23945 695 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CBSP35520 551 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 SOX9P48436 509 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CRYBA2P53672 197 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CDC16Q13042 620 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CAMK2GQ13555 558 aaPredicted RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 BOP1Q14137 746 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SELPLGQ14242 412 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 SQLEQ14534 574 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 BNC2Q6ZN30 1099 aaPredicted RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 NEK10Q6ZWH5 1172 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 USP45Q70EL2 814 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 TP53I13Q8NBR0 393 aaPredicted RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 FAM156AQ8NDB6 213 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CEP70Q8NHQ1 597 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 LRIG1Q96JA1 1093 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 NOL11Q9H8H0 719 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SLC23A2Q9UGH3 650 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 PPT2Q9UMR5 302 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 VPS26AO75436 327 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 ADRB3P13945 408 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 SLC6A2P23975 617 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 UFM1P61960 85 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 GTF2H2Q13888 395 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 GRM2Q14416 872 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CRY1Q16526 586 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 POM121L1PQ3SYA9 428 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 USP39Q53GS9 565 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 RARS2Q5T160 578 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 GTF2H2CQ6P1K8 395 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 FBXL19Q6PCT2 694 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 LMNTD1Q8N9Z9 388 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 SMRP1Q8NCR6 262 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 PPP4R1Q8TF05 950 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 LBHD1Q9BQE6 289 aaPredicted RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 THTPAQ9BU02 230 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 NUSAP1Q9BXS6 441 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SPNS1Q9H2V7 528 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 TRIM39Q9HCM9 518 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 S100A14Q9HCY8 104 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 INTS7Q9NVH2 962 aaKnown RBP6.44□□□□□ -1.38
USP46-202ENST00000451218 SLC25A13Q9UJS0 675 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 CDH7Q9ULB5 785 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 RNF11Q9Y3C5 154 aa6.44□□□□□ -1.38
USP46-202ENST00000451218 ZNF197O14709 1029 aa6.43□□□□□ -1.38
USP46-202ENST00000451218 GPR37O15354 613 aa6.43□□□□□ -1.38
USP46-202ENST00000451218 TSPAN6O43657 245 aa6.43□□□□□ -1.38
USP46-202ENST00000451218 BCAS2O75934 225 aaPredicted RBP6.43□□□□□ -1.38
USP46-202ENST00000451218 GSTM1P09488 218 aa6.43□□□□□ -1.38
USP46-202ENST00000451218 MPC1LP0DKB6 136 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms