RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 TCAF1Q9Y4C2 921 aa18.86■□□□□ 0.61
USP40-207ENST00000450940 SLC5A10A0PJK1 596 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 NKX2-8O15522 239 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 TIAF1O95411 115 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 GOT2P00505 430 aaKnown RBP18.85■□□□□ 0.61
USP40-207ENST00000450940 FTH1P02794 183 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 MT-ND3P03897 115 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 FAM87AP0C7U9 286 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 EBLN1P0CF75 366 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 POLR2CP19387 275 aaPredicted RBP18.85■□□□□ 0.61
USP40-207ENST00000450940 F8A1P23610 371 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 ACADLP28330 430 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 PREPP48147 710 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 MC1RQ01726 317 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 KCNAB1Q14722 419 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 BORAQ6PGQ7 559 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 PHC3Q8NDX5 983 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 OR4L1Q8NH43 312 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.85■□□□□ 0.61
USP40-207ENST00000450940 ELMO2Q96JJ3 720 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 TTC1Q99614 292 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 ADNPQ9H2P0 1102 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 SRMSQ9H3Y6 488 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 C1GALT1Q9NS00 363 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 FGF21Q9NSA1 209 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 HOMER3Q9NSC5 361 aa18.85■□□□□ 0.61
USP40-207ENST00000450940 GEMIN8Q9NWZ8 242 aaKnown RBP18.85■□□□□ 0.61
USP40-207ENST00000450940 BTN3A3O00478 584 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 OR56A5P0C7T3 313 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 ARL4DP49703 201 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 TUBB4BP68371 445 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PLOD1Q02809 727 aaPredicted RBP18.84■□□□□ 0.61
USP40-207ENST00000450940 CDC20Q12834 499 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PRKAA1Q13131 559 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 TUBB2AQ13885 445 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PCID2Q5JVF3 399 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PWWP2BQ6NUJ5 590 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 OR52E1Q8NGJ3 308 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 OR8K5Q8NH50 307 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 STARD8Q92502 1023 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 STAMBPL1Q96FJ0 436 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PPM1MQ96MI6 270 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 TUBB2BQ9BVA1 445 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PITPNM3Q9BZ71 974 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 TWSG1Q9GZX9 223 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 LATS2Q9NRM7 1088 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PADI1Q9ULC6 663 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 PCDHGA6Q9Y5G7 932 aa18.84■□□□□ 0.61
USP40-207ENST00000450940 BHMG1C9JSJ3 638 aaPredicted RBP18.83■□□□□ 0.6
USP40-207ENST00000450940 AP3B1O00203 1094 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 BTN3A1O00481 513 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 CEP104O60308 925 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 OR1I1O60431 355 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 RECKO95980 971 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 CCNYL3P0C7X3 344 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 MSL3P1P0C860 447 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 PRDX3P30048 256 aaKnown RBP18.83■□□□□ 0.6
USP40-207ENST00000450940 KCNJ1P48048 391 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 ARCN1P48444 511 aaKnown RBP18.83■□□□□ 0.6
USP40-207ENST00000450940 NPY2RP49146 381 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 TMTC4Q5T4D3 741 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 AMIGO1Q86WK6 493 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 ADGRF3Q8IZF5 1079 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 PRELID2Q8N945 189 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 PPHLN1Q8NEY8 458 aaKnown RBP18.83■□□□□ 0.6
USP40-207ENST00000450940 OR6P1Q8NGX9 317 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 ELMO1Q92556 727 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 ZNF501Q96CX3 271 aaPredicted RBP18.83■□□□□ 0.6
USP40-207ENST00000450940 CHRAC1Q9NRG0 131 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 LNPEPQ9UIQ6 1025 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 CROTQ9UKG9 612 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 SPTBP11277 2137 aa18.83■□□□□ 0.6
USP40-207ENST00000450940 F8W8V4 182 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 NRDCO43847 1150 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 OAS2P29728 719 aaKnown RBP18.82■□□□□ 0.6
USP40-207ENST00000450940 DLSTP36957 453 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 PPARGP37231 505 aaPredicted RBP18.82■□□□□ 0.6
USP40-207ENST00000450940 CDK16Q00536 496 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 SEMA3AQ14563 771 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 TBC1D21Q8IYX1 336 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 NRTNQ99748 197 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 IL22Q9GZX6 179 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 SYTL2Q9HCH5 934 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 LHX9Q9NQ69 397 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 KCND1Q9NSA2 647 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 TREX1Q9NSU2 369 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 TUBD1Q9UJT1 453 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 KCND3Q9UK17 655 aa18.82■□□□□ 0.6
USP40-207ENST00000450940 SPTA1P02549 2419 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 SLC9B1P1A6NJY1 282 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 TPBGLP0DKB5 382 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 TCN2P20062 427 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 TPSB2P20231 275 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 CDH3P22223 829 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 CXCR5P32302 372 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 CCR10P46092 362 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 PRAMEP78395 509 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 PRKG2Q13237 762 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 TPSAB1Q15661 275 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 GPR19Q15760 415 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms